RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	VWCE	Q96DN2	955 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	HHIPL1	Q96JK4	782 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	RSRP1	Q9BUV0	290 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	HDAC8	Q9BY41	377 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	OSBPL2	Q9H1P3	480 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	LUC7L	Q9NQ29	371 aa	Known RBP	4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	SBNO2	Q9Y2G9	1366 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	ZC3H12D	A2A288	527 aa	Known RBP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	ANKRD62	A6NC57	917 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	DNAJA2	O60884	412 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	PNLIP	P16233	465 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	CDK11B	P21127	795 aa	Known RBP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	SLFN12	Q8IYM2	578 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	LINC01356	Q8N9X3	169 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	PHC3	Q8NDX5	983 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	RASGRP4	Q8TDF6	673 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	PWWP2A	Q96N64	755 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	TMEM74	Q96NL1	305 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	TBX22	Q9Y458	520 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	PCDHA5	Q9Y5H7	936 aa		4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	MRPL42	Q9Y6G3	142 aa	Known RBP	4.56	□□□□□ -1.68
CPNE8-208	ENST00000551855	FFAR3	O14843	346 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	FKTN	O75072	461 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	SSB	P05455	408 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	KIR2DL1	P43626	348 aa	Predicted RBP	4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	KIR2DL2	P43627	348 aa	Predicted RBP	4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	YARS	P54577	528 aa	Known RBP	4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	ERVFRD-1	P60508	538 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	TCEAL1	Q15170	157 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	ERICH6B	Q5W0A0	696 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	SDE2	Q6IQ49	451 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	RNF111	Q6ZNA4	994 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	ANKS3	Q6ZW76	656 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	FRMD5	Q7Z6J6	570 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	NOP9	Q86U38	636 aa	Known RBP	4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	GOLM1	Q8NBJ4	401 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	BORCS6	Q96GS4	357 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	TCTN2	Q96GX1	697 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	RHOV	Q96L33	236 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	NOC4L	Q9BVI4	516 aa	Known RBP	4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	KANSL2	Q9H9L4	492 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	KLHL3	Q9UH77	587 aa		4.55	□□□□□ -1.68
CPNE8-208	ENST00000551855	FAM221B	A6H8Z2	402 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	CCDC85C	A6NKD9	419 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	NMI	Q13287	307 aa	Predicted RBP	4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	SNW1	Q13573	536 aa	Known RBP	4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	BBS9	Q3SYG4	887 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	HHIPL2	Q6UWX4	724 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	TMC6	Q7Z403	805 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	TMC3	Q7Z5M5	1100 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	ADGRG2	Q8IZP9	1017 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	ARMC5	Q96C12	935 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	ANAPC16	Q96DE5	110 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	CCDC74B	Q96LY2	380 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	KIF2C	Q99661	725 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	ASPN	Q9BXN1	380 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	REV1	Q9UBZ9	1251 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	TCFL5	Q9UL49	500 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	PPT2	Q9UMR5	302 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	MINPP1	Q9UNW1	487 aa		4.54	□□□□□ -1.68
CPNE8-208	ENST00000551855	FAM221A	A4D161	298 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	GREM1	O60565	184 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	BUB1B	O60566	1050 aa	Predicted RBP	4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	LIMS1	P48059	325 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	CEBPA	P49715	358 aa	Predicted RBP	4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	RTP1	P59025	263 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	CAMK2G	Q13555	558 aa	Predicted RBP	4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	SEZ6	Q53EL9	994 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	SNAP47	Q5SQN1	464 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	EGFLAM	Q63HQ2	1017 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	FAM169B	Q8N8A8	192 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	GPATCH3	Q96I76	525 aa		4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	TMA7	Q9Y2S6	64 aa	Known RBP	4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.53	□□□□□ -1.68
CPNE8-208	ENST00000551855		A0A1B0GTL3	188 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	FADS2P1	A8MWK0	482 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	NUDT19	A8MXV4	375 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	KLF4	O43474	513 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	AKAP8	O43823	692 aa	Known RBP	4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	GRIN3B	O60391	1043 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	F13A1	P00488	732 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	MPO	P05164	745 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	HMGB1	P09429	215 aa	Known RBP	4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	KCNC1	P48547	511 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	SLURP1	P55000	103 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	SERINC3	Q13530	473 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	RAB3GAP1	Q15042	981 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	HSF5	Q4G112	596 aa	Predicted RBP	4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	CKAP2L	Q8IYA6	745 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	PHACTR4	Q8IZ21	702 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	CELF2-AS1	Q8N7Q2	184 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	DAGLB	Q8NCG7	672 aa		4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	ENOX1	Q8TC92	643 aa	Known RBP	4.52	□□□□□ -1.69
CPNE8-208	ENST00000551855	NKD1	Q969G9	470 aa		4.52	□□□□□ -1.69

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