RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PCDHGC5Q9Y5F6 944 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 ZBED9Q6R2W3 1325 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 ZNF521Q96K83 1311 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
SCAF11-213ENST00000550629 PAGE1O75459 146 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 USP17L7P0C7H9 530 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 ADMP35318 185 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
SCAF11-213ENST00000550629 ID3Q02535 119 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 TEFQ10587 303 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
SCAF11-213ENST00000550629 MAP1SQ66K74 1059 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-213ENST00000550629 MPRIPQ6WCQ1 1025 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 ABI1Q8IZP0 508 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 IL17REQ8NFR9 667 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 TBC1D32Q96NH3 1257 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 CEP44Q9C0F1 390 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 SLC52A2Q9HAB3 445 aa7.44□□□□□ -1.22
SCAF11-213ENST00000550629 RRP7AQ9Y3A4 280 aaKnown RBP7.44□□□□□ -1.22
SCAF11-213ENST00000550629 FOSL1P15407 271 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 BMP6P22004 513 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 GNA15P30679 374 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 ZNF252P-AS1Q0IIN9 211 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 MAP7Q14244 749 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 TAF7Q15545 349 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-213ENST00000550629 EAPPQ56P03 285 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-213ENST00000550629 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-213ENST00000550629 MCM10Q7L590 875 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 GATA6Q92908 595 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 METTL22Q9BUU2 404 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-213ENST00000550629 EMILIN2Q9BXX0 1053 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 LGR6Q9HBX8 967 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 CBX8Q9HC52 389 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 DISC1Q9NRI5 854 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 IFT57Q9NWB7 429 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 SCN11AQ9UI33 1791 aa7.43□□□□□ -1.22
SCAF11-213ENST00000550629 NHSQ6T4R5 1651 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 CHL1O00533 1208 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-213ENST00000550629 GNAI1P63096 354 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 VSIG10LQ86VR7 867 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 NPAS4Q8IUM7 802 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 GPBAR1Q8TDU6 330 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 DUSP9Q99956 384 aaKnown RBP7.42□□□□□ -1.22
SCAF11-213ENST00000550629 MYH16Q9H6N6 1097 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 TMOD3Q9NYL9 352 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 BRWD3Q6RI45 1802 aa7.42□□□□□ -1.22
SCAF11-213ENST00000550629 DOT1LQ8TEK3 1739 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 TOGARAM1Q9Y4F4 1720 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 DLG5Q8TDM6 1919 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 E9PSI1 815 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 CELA3AP09093 270 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 ZNF853P0CG23 659 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
SCAF11-213ENST00000550629 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
SCAF11-213ENST00000550629 DCTN1Q14203 1278 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 RASIP1Q5U651 963 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 PIGBQ92521 554 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 SMARCC1Q92922 1105 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-213ENST00000550629 GZF1Q9H116 711 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-213ENST00000550629 ATXN3LQ9H3M9 355 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 C1GALT1Q9NS00 363 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
SCAF11-213ENST00000550629 SIPA1L3O60292 1781 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-213ENST00000550629 FAM170BA6NMN3 283 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
SCAF11-213ENST00000550629 TP53INP2Q8IXH6 220 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 FBXL18Q96ME1 805 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 THUMPD2Q9BTF0 503 aaKnown RBP7.4□□□□□ -1.22
SCAF11-213ENST00000550629 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 PIDD1Q9HB75 910 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 CCDC39Q9UFE4 941 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 AK5Q9Y6K8 562 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 SOS1Q07889 1333 aaPredicted RBP7.4□□□□□ -1.22
SCAF11-213ENST00000550629 PAPPAQ13219 1627 aa7.4□□□□□ -1.22
SCAF11-213ENST00000550629 EP400Q96L91 3159 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 KCNQ2O43526 872 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 FGD1P98174 961 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 SLFN5Q08AF3 891 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 ZNF790Q6PG37 636 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
SCAF11-213ENST00000550629 TTC5Q8N0Z6 440 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 SYTL4Q96C24 671 aaPredicted RBP7.39□□□□□ -1.23
SCAF11-213ENST00000550629 ACSBG1Q96GR2 724 aa7.39□□□□□ -1.23
SCAF11-213ENST00000550629 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
SCAF11-213ENST00000550629 ZNF831Q5JPB2 1677 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 HEG1Q9ULI3 1381 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 FANCIQ9NVI1 1328 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 CYP26A1O43174 497 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 RNGTTO60942 597 aaKnown RBP7.38□□□□□ -1.23
SCAF11-213ENST00000550629 TRIM37O94972 964 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms