RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.2
CCDC38-208ENST00000549876 MEIS1O00470 390 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 CELA3BP08861 270 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 RPTNQ6XPR3 784 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 PRRT2Q7Z6L0 340 aaPredicted RBP7.52□□□□□ -1.21
CCDC38-208ENST00000549876 ZDHHC14Q8IZN3 488 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 NUP43Q8NFH3 380 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 PWWP2AQ96N64 755 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 SLC6A18Q96N87 628 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 JMJD8Q96S16 334 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 CDADC1Q9BWV3 514 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 MKRN2Q9H000 416 aaKnown RBP7.52□□□□□ -1.21
CCDC38-208ENST00000549876 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 UBP1Q9NZI7 540 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 ADAMTS1Q9UHI8 967 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
CCDC38-208ENST00000549876 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 BUB1BO60566 1050 aaPredicted RBP7.51□□□□□ -1.21
CCDC38-208ENST00000549876 IGFBP6P24592 240 aaPredicted RBP7.51□□□□□ -1.21
CCDC38-208ENST00000549876 ITGAEP38570 1179 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 CAP1Q01518 475 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 AUHQ13825 339 aaKnown RBP7.51□□□□□ -1.21
CCDC38-208ENST00000549876 SEZ6Q53EL9 994 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 RTP2Q5QGT7 225 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 GK5Q6ZS86 529 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 IMPACTQ9P2X3 320 aa7.51□□□□□ -1.21
CCDC38-208ENST00000549876 NCKAP1LP55160 1127 aa7.5□□□□□ -1.21
CCDC38-208ENST00000549876 PLEKHN1Q494U1 663 aaPredicted RBP7.5□□□□□ -1.21
CCDC38-208ENST00000549876 CRTC3Q6UUV7 619 aa7.5□□□□□ -1.21
CCDC38-208ENST00000549876 BCL2L13Q9BXK5 485 aa7.5□□□□□ -1.21
CCDC38-208ENST00000549876 FBXL21Q9UKT6 434 aa7.5□□□□□ -1.21
CCDC38-208ENST00000549876 ZC3H12DA2A288 527 aaKnown RBP7.49□□□□□ -1.21
CCDC38-208ENST00000549876 MAPKAPK2P49137 400 aa7.49□□□□□ -1.21
CCDC38-208ENST00000549876 MVKQ03426 396 aa7.49□□□□□ -1.21
CCDC38-208ENST00000549876 MRPL58Q14197 206 aaKnown RBP7.49□□□□□ -1.21
CCDC38-208ENST00000549876 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
CCDC38-208ENST00000549876 SLC9A7Q96T83 725 aa7.49□□□□□ -1.21
CCDC38-208ENST00000549876 ADAM7Q9H2U9 754 aa7.49□□□□□ -1.21
CCDC38-208ENST00000549876 FFAR3O14843 346 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 SHOXO15266 292 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 GSNP06396 782 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 MSL3P1P0C860 447 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 ZNF165P49910 485 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 NR1I3Q14994 352 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 FRMD5Q7Z6J6 570 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 GGNQ86UU5 652 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 SLITRK4Q8IW52 837 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 GIPC2Q8TF65 315 aa7.48□□□□□ -1.21
CCDC38-208ENST00000549876 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
CCDC38-208ENST00000549876 FBLN1P23142 703 aa7.47□□□□□ -1.21
CCDC38-208ENST00000549876 APOBRQ0VD83 1088 aa7.47□□□□□ -1.21
CCDC38-208ENST00000549876 ERICH6BQ5W0A0 696 aa7.47□□□□□ -1.21
CCDC38-208ENST00000549876 ZC3H14Q6PJT7 736 aaKnown RBP7.47□□□□□ -1.21
CCDC38-208ENST00000549876 SLC12A9Q9BXP2 914 aa7.47□□□□□ -1.21
CCDC38-208ENST00000549876 SUCOQ9UBS9 1254 aaKnown RBP7.47□□□□□ -1.21
CCDC38-208ENST00000549876 ADRB1P08588 477 aa7.46□□□□□ -1.22
CCDC38-208ENST00000549876 MCM4P33991 863 aa7.46□□□□□ -1.22
CCDC38-208ENST00000549876 ZNF200P98182 395 aaPredicted RBP7.46□□□□□ -1.22
CCDC38-208ENST00000549876 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
CCDC38-208ENST00000549876 INTS3Q68E01 1043 aaKnown RBP7.46□□□□□ -1.22
CCDC38-208ENST00000549876 C7orf61Q8IZ16 206 aa7.46□□□□□ -1.22
CCDC38-208ENST00000549876 NT5C1AQ9BXI3 368 aa7.46□□□□□ -1.22
CCDC38-208ENST00000549876 SRRTQ9BXP5 876 aaKnown RBP7.46□□□□□ -1.22
CCDC38-208ENST00000549876 GGT7Q9UJ14 662 aa7.46□□□□□ -1.22
CCDC38-208ENST00000549876 C9IYK1 514 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 ACRP10323 421 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 LIMS1P48059 325 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 SLURP1P55000 103 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 EFEMP1Q12805 493 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 LDLRAD1Q5T700 205 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 HLA-DQA1Q5Y7H0 255 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 NKD1Q969G9 470 aa7.45□□□□□ -1.22
CCDC38-208ENST00000549876 SRGAP3O43295 1099 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 DBHP09172 617 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 GSTM1P09488 218 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 PFKLP17858 780 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 VWA3BQ502W6 1294 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 NLGN1Q8N2Q7 840 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 DHRS1Q96LJ7 313 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 DSCC1Q9BVC3 393 aa7.44□□□□□ -1.22
CCDC38-208ENST00000549876 CYBBP04839 570 aa7.43□□□□□ -1.22
CCDC38-208ENST00000549876 PAQR3Q6TCH7 311 aa7.43□□□□□ -1.22
CCDC38-208ENST00000549876 PLA2G2DQ9UNK4 145 aa7.43□□□□□ -1.22
CCDC38-208ENST00000549876 HCFC2Q9Y5Z7 792 aa7.43□□□□□ -1.22
CCDC38-208ENST00000549876 H0Y8X5 98 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 FGF10O15520 208 aaPredicted RBP7.42□□□□□ -1.22
CCDC38-208ENST00000549876 PRICKLE3O43900 615 aaPredicted RBP7.42□□□□□ -1.22
CCDC38-208ENST00000549876 PLA2G1BP04054 148 aaKnown RBP7.42□□□□□ -1.22
CCDC38-208ENST00000549876 ZNF16P17020 682 aaPredicted RBP7.42□□□□□ -1.22
CCDC38-208ENST00000549876 KCNC1P48547 511 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
CCDC38-208ENST00000549876 RTP5Q14D33 572 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 TARBP2Q15633 366 aaKnown RBP7.42□□□□□ -1.22
CCDC38-208ENST00000549876 SPATS1Q496A3 300 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 ZFYVE27Q5T4F4 411 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
CCDC38-208ENST00000549876 NAT16Q8N8M0 369 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms