RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 H7C1D1 291 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 BCAMP50895 628 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 PPP2R5BQ15173 497 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 IFIT1BQ5T764 474 aaKnown RBP15.38■□□□□ 0.05
HDAC7-228ENST00000548938 CCNI2Q6ZMN8 369 aaPredicted RBP15.38■□□□□ 0.05
HDAC7-228ENST00000548938 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 EFCAB13Q8IY85 973 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 RPGRIP1Q96KN7 1286 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 USP21Q9UK80 565 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 PDS5AQ29RF7 1337 aaKnown RBP15.38■□□□□ 0.05
HDAC7-228ENST00000548938 SPATA31A6Q5VVP1 1343 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 CYP2D7A0A087X1C5 515 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 ERVV-1B6SEH8 477 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 KRT86O43790 486 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 SHOX2O60902 331 aaPredicted RBP15.37■□□□□ 0.05
HDAC7-228ENST00000548938 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
HDAC7-228ENST00000548938 ADSSL1Q8N142 457 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 FAM76AQ8TAV0 307 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 AGPAT5Q9NUQ2 364 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 LRP2BPQ9P2M1 347 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 CNTNAP5Q8WYK1 1306 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 A0A1W2PQC6 194 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 B4DLN1 442 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 KRT83P78385 493 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 TROAPQ12815 778 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 MEA1Q16626 185 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 TADA2BQ86TJ2 420 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 CERKQ8TCT0 537 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 EHD4Q9H223 541 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 BAZ2BQ9UIF8 2168 aaKnown RBP15.37■□□□□ 0.05
HDAC7-228ENST00000548938 MACROD2A1Z1Q3 448 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 GOLGA6CA6NDK9 693 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 GOLGA6BA6NDN3 693 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 GOLGA6DP0CG33 693 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 IDEP14735 1019 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 CYP7A1P22680 504 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 KLK7P49862 253 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 EEF2KMTQ96G04 330 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
HDAC7-228ENST00000548938 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 STAT6P42226 847 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 CCT5P48643 541 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 CYP27A1Q02318 531 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 TRIM47Q96LD4 638 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 RABEP2Q9H5N1 569 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 JADE2Q9NQC1 790 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 IQSEC3Q9UPP2 1182 aaPredicted RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 AENQ8WTP8 325 aaKnown RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 PYM1Q9BRP8 204 aaKnown RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 TTYH3Q9C0H2 523 aa15.36■□□□□ 0.05
HDAC7-228ENST00000548938 NHEJ1Q9H9Q4 299 aaPredicted RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
HDAC7-228ENST00000548938 CPP00450 1065 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 EEF1GP26641 437 aaKnown RBP15.35■□□□□ 0.05
HDAC7-228ENST00000548938 CYLC1P35663 651 aaPredicted RBP15.35■□□□□ 0.05
HDAC7-228ENST00000548938 IRAK1P51617 712 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 ZNF662Q6ZS27 426 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 PTF1AQ7RTS3 328 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 SRBD1Q8N5C6 995 aaKnown RBP15.35■□□□□ 0.05
HDAC7-228ENST00000548938 RRP36Q96EU6 259 aaKnown RBP15.35■□□□□ 0.05
HDAC7-228ENST00000548938 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 DUOX1Q9NRD9 1551 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 ANO9A1A5B4 782 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 TRIM21P19474 475 aaKnown RBP15.35■□□□□ 0.05
HDAC7-228ENST00000548938 NLRP5P59047 1200 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
HDAC7-228ENST00000548938 ZNF34Q8IZ26 560 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 MICALL1Q8N3F8 863 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 FAM184BQ9ULE4 1060 aa15.35■□□□□ 0.05
HDAC7-228ENST00000548938 PP2D1A8MPX8 630 aa15.34■□□□□ 0.05
HDAC7-228ENST00000548938 IRX3P78415 501 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 NAALADL2Q58DX5 795 aa15.34■□□□□ 0.05
HDAC7-228ENST00000548938 SND1Q7KZF4 910 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 SMCR8Q8TEV9 937 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 DRC1Q96MC2 740 aa15.34■□□□□ 0.05
HDAC7-228ENST00000548938 THAP9Q9H5L6 903 aa15.34■□□□□ 0.05
HDAC7-228ENST00000548938 A0A087WUV0 522 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 IPO7O95373 1038 aaKnown RBP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 SRGNP10124 158 aa15.34■□□□□ 0.05
HDAC7-228ENST00000548938 PURBQ96QR8 312 aaKnown RBP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 DISC1Q9NRI5 854 aa15.34■□□□□ 0.05
HDAC7-228ENST00000548938 MAGEC2Q9UBF1 373 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-228ENST00000548938 TRAPPC10P48553 1259 aa15.33■□□□□ 0.05
HDAC7-228ENST00000548938 DNM2P50570 870 aa15.33■□□□□ 0.05
HDAC7-228ENST00000548938 EXOC1Q9NV70 894 aa15.33■□□□□ 0.05
HDAC7-228ENST00000548938 ZNHIT6Q9NWK9 470 aaKnown RBP15.33■□□□□ 0.05
HDAC7-228ENST00000548938 ABCF2Q9UG63 623 aa15.33■□□□□ 0.05
HDAC7-228ENST00000548938 DMGDHQ9UI17 866 aaKnown RBP15.33■□□□□ 0.05
HDAC7-228ENST00000548938 GRIN2DO15399 1336 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 MAGEB6P1A0A0J9YX57 407 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 ZNF263O14978 683 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 KLRC4O43908 158 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 SCG2P13521 617 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 HSPA1LP34931 641 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 LONP1P36776 959 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms