RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 INHBEP58166 350 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
SCRN3-212ENST00000548868 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
SCRN3-212ENST00000548868 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 ANKRD23Q86SG2 305 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 HOMER1Q86YM7 354 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 ALG1Q9BT22 464 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 FBXO28Q9NVF7 368 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 PNMA3Q9UL41 463 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 DDIT3P35638 169 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 DEFB115Q30KQ5 88 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 LARP1BQ659C4 914 aaKnown RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 BRI3BPQ8WY22 251 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 RBBP6Q7Z6E9 1792 aaKnown RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 SMCHD1A6NHR9 2005 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 VWA5AO00534 786 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 DTNBO60941 627 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 ZBED4O75132 1171 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 TRIM29Q14134 588 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 LBX2Q6XYB7 198 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 FBXO11Q86XK2 927 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 AMNQ9BXJ7 453 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 BARHL2Q9NY43 387 aa12.98□□□□□ -0.33
SCRN3-212ENST00000548868 CTDP1Q9Y5B0 961 aaPredicted RBP12.98□□□□□ -0.33
SCRN3-212ENST00000548868 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
SCRN3-212ENST00000548868 BTBD19C9JJ37 291 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 SYT1P21579 422 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 OAZ1P54368 228 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 SREBF2Q12772 1141 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 WWC2Q6AWC2 1192 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
SCRN3-212ENST00000548868 HEATR3Q7Z4Q2 680 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 ATG4CQ96DT6 458 aa12.97□□□□□ -0.33
SCRN3-212ENST00000548868 ASCC2Q9H1I8 757 aaPredicted RBP12.97□□□□□ -0.33
SCRN3-212ENST00000548868 H3BQV1 296 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 STXBP3O00186 592 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 PDHXO00330 501 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 STX6O43752 255 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 ICAM1P05362 532 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 NUCB2P80303 420 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 NOGQ13253 232 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 FBXO18Q8NFZ0 1043 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 AIFM3Q96NN9 605 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 P2RX7Q99572 595 aaKnown RBP12.96□□□□□ -0.33
SCRN3-212ENST00000548868 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.33
SCRN3-212ENST00000548868 ESYT2A0FGR8 921 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 PPP1R11O60927 126 aaPredicted RBP12.95□□□□□ -0.34
SCRN3-212ENST00000548868 CALML3P27482 149 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 HERVK_113P62684 666 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 KRT40Q6A162 431 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 TEX2Q8IWB9 1127 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
SCRN3-212ENST00000548868 CAPNS2Q96L46 248 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 PTPN18Q99952 460 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 ZNF536O15090 1300 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 ABCB11O95342 1321 aa12.95□□□□□ -0.34
SCRN3-212ENST00000548868 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
SCRN3-212ENST00000548868 THSD7BQ9C0I4 1608 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 MMP1P03956 469 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 TM4SF4P48230 202 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 NAPAP54920 295 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 SNAP25P60880 206 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 COA7Q96BR5 231 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 PARK7Q99497 189 aaKnown RBP12.94□□□□□ -0.34
SCRN3-212ENST00000548868 PHF20Q9BVI0 1012 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 GLT8D2Q9H1C3 349 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
SCRN3-212ENST00000548868 GNA11P29992 359 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
SCRN3-212ENST00000548868 NLRP5P59047 1200 aa12.94□□□□□ -0.34
SCRN3-212ENST00000548868 KIF23Q02241 960 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms