RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 DNAJC2Q99543 621 aaKnown RBP10.21□□□□□ -0.77
TROAP-208ENST00000548817 NOC4LQ9BVI4 516 aaKnown RBP10.21□□□□□ -0.77
TROAP-208ENST00000548817 UBE2ZQ9H832 354 aaPredicted RBP10.21□□□□□ -0.77
TROAP-208ENST00000548817 ARHGEF10LQ9HCE6 1279 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.77
TROAP-208ENST00000548817 ZFHX2Q9C0A1 2572 aaPredicted RBP10.21□□□□□ -0.78
TROAP-208ENST00000548817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.2□□□□□ -0.78
TROAP-208ENST00000548817 GOLIM4O00461 696 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 RLBP1P12271 317 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 ACTN1P12814 892 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 PDE6AP16499 860 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 COL4A4P53420 1690 aaPredicted RBP10.2□□□□□ -0.78
TROAP-208ENST00000548817 PTPN5P54829 565 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 GRB10Q13322 594 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 PARP14Q460N5 1801 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
TROAP-208ENST00000548817 TMEM179Q6ZVK1 233 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 RIOX2Q8IUF8 465 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 ARNTL2Q8WYA1 636 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 RIOK1Q9BRS2 568 aaKnown RBP10.2□□□□□ -0.78
TROAP-208ENST00000548817 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.782e-6■■■□□ 16.8
TROAP-208ENST00000548817 CHMP4BQ9H444 224 aaKnown RBP10.2□□□□□ -0.78
TROAP-208ENST00000548817 ZNF532Q9HCE3 1301 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 SWAP70Q9UH65 585 aa10.2□□□□□ -0.78
TROAP-208ENST00000548817 CACNA1HO95180 2353 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 ZNF536O15090 1300 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 MYADML2A6NDP7 307 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 EPOPA6NHQ4 379 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 FLOT1O75955 427 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 PGK2P07205 417 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 PKN1Q16512 942 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 GNASQ5JWF2 1037 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 KRT40Q6A162 431 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
TROAP-208ENST00000548817 RPAP2Q8IXW5 612 aaPredicted RBP10.19□□□□□ -0.78
TROAP-208ENST00000548817 PANK1Q8TE04 598 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.19□□□□□ -0.78
TROAP-208ENST00000548817 ATG4CQ96DT6 458 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 WNT8AQ9H1J5 351 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 FAM50BQ9Y247 325 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 NAV1Q8NEY1 1877 aa10.19□□□□□ -0.78
TROAP-208ENST00000548817 UMODL1Q5DID0 1318 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 MYH8P13535 1937 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 GRXCR2A6NFK2 248 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 LPXNO60711 386 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 RAB11FIP3O75154 756 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 SNAI1O95863 264 aaPredicted RBP10.18□□□□□ -0.78
TROAP-208ENST00000548817 CCL23P55773 120 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 TMEM132BQ14DG7 1078 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 ERMP1Q7Z2K6 904 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 CCDC17Q96LX7 622 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 UPF3BQ9BZI7 483 aaKnown RBP10.18□□□□□ -0.78
TROAP-208ENST00000548817 ABHD16BQ9H3Z7 469 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 CERS4Q9HA82 394 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 DCP1AQ9NPI6 582 aaPredicted RBP10.18□□□□□ -0.78
TROAP-208ENST00000548817 ATP8A2Q9NTI2 1148 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 PRKAG3Q9UGI9 489 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 ZHX1Q9UKY1 873 aaPredicted RBP10.18□□□□□ -0.78
TROAP-208ENST00000548817 ADAMTS5Q9UNA0 930 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 TRIOO75962 3097 aa10.18□□□□□ -0.78
TROAP-208ENST00000548817 COL11A1P12107 1806 aaPredicted RBP10.17□□□□□ -0.78
TROAP-208ENST00000548817 WDR46O15213 610 aaKnown RBP10.17□□□□□ -0.78
TROAP-208ENST00000548817 RAD21O60216 631 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 GUCY1A2P33402 732 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 RFC2P35250 354 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 ICA1Q05084 483 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 GABPAQ06546 454 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 ACVR2BQ13705 512 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 PTCRAQ6ISU1 281 aaPredicted RBP10.17□□□□□ -0.78
TROAP-208ENST00000548817 ZSCAN25Q6NSZ9 544 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 HFE2Q6ZVN8 426 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 HERC6Q8IVU3 1022 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 LCORLQ8N3X6 602 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.17□□□□□ -0.78
TROAP-208ENST00000548817 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 VWCEQ96DN2 955 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 ARMT1Q9H993 441 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 PAG1Q9NWQ8 432 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
TROAP-208ENST00000548817 DNAJC25-GNG10A0A024R161 153 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 CTAGE5O15320 804 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 MBD4O95243 580 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 SUPT20HL2P0C7V6 817 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 CYP2D6P10635 497 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 IL9P15248 144 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 KCNA5P22460 613 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 STAT3P40763 770 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 TTLL4Q14679 1199 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 BMP8AQ7Z5Y6 402 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 SPICE1Q8N0Z3 855 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 DYNLL2Q96FJ2 89 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 AGBL1Q96MI9 1066 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 IRF2BPLQ9H1B7 796 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 BOLA2Q9H3K6 86 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 VCPKMTQ9H867 229 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 GOPCQ9HD26 462 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms