RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 JMJD8Q96S16 334 aa4.15□□□□□ -1.75
CEP290-204ENST00000547926 ADAM30Q9UKF2 790 aa4.15□□□□□ -1.75
CEP290-204ENST00000547926 TLR6Q9Y2C9 796 aa4.15□□□□□ -1.75
CEP290-204ENST00000547926 AK5Q9Y6K8 562 aa4.15□□□□□ -1.75
CEP290-204ENST00000547926 MVKQ03426 396 aa4.14□□□□□ -1.75
CEP290-204ENST00000547926 TMCO4Q5TGY1 634 aa4.14□□□□□ -1.75
CEP290-204ENST00000547926 MEI1Q5TIA1 1274 aa4.14□□□□□ -1.75
CEP290-204ENST00000547926 LINC00116Q8NCU8 138 aa4.14□□□□□ -1.75
CEP290-204ENST00000547926 DVL3Q92997 716 aaPredicted RBP4.14□□□□□ -1.75
CEP290-204ENST00000547926 KIF2CQ99661 725 aa4.14□□□□□ -1.75
CEP290-204ENST00000547926 SPATA6Q9NWH7 488 aaPredicted RBP4.14□□□□□ -1.75
CEP290-204ENST00000547926 TTF2Q9UNY4 1162 aaKnown RBP4.14□□□□□ -1.75
CEP290-204ENST00000547926 FZD7O75084 574 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 CTSHP09668 335 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 ARL4AP40617 200 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 GJA9P57773 515 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 DAB2P98082 770 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 PDE4BQ07343 736 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 PSMD2Q13200 908 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 GALNT18Q6P9A2 607 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 SLFN12Q8IYM2 578 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 NLGN1Q8N2Q7 840 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 RXFP1Q9HBX9 757 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 KLHL3Q9UH77 587 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 ACSL6Q9UKU0 697 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 LTBP3Q9NS15 1303 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 PRAMEF1O95521 474 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 PLATP00750 562 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 PFKLP17858 780 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 MAPKAPK2P49137 400 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 PCBP3P57721 371 aaKnown RBP4.13□□□□□ -1.75
CEP290-204ENST00000547926 ICAM4Q14773 271 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 AGMOQ6ZNB7 445 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 SV2BQ7L1I2 683 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 DAGLBQ8NCG7 672 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 FCRL2Q96LA5 508 aaPredicted RBP4.13□□□□□ -1.75
CEP290-204ENST00000547926 FRMD6Q96NE9 622 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 ASPNQ9BXN1 380 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 VPS11Q9H270 941 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 WDR26Q9H7D7 661 aa4.13□□□□□ -1.75
CEP290-204ENST00000547926 F6X3S4 739 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 MEIS1O00470 390 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 ERCC3P19447 782 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 MFAP1P55081 439 aaKnown RBP4.12□□□□□ -1.75
CEP290-204ENST00000547926 XPCQ01831 940 aaPredicted RBP4.12□□□□□ -1.75
CEP290-204ENST00000547926 IGFL4Q6B9Z1 124 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 TMC4Q7Z404 712 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 TTC9BQ8N6N2 239 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 TNFRSF18Q9Y5U5 241 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 WTIPA6NIX2 430 aaPredicted RBP4.12□□□□□ -1.75
CEP290-204ENST00000547926 RPL6Q02878 288 aaKnown RBP4.12□□□□□ -1.75
CEP290-204ENST00000547926 PALM2Q8IXS6 379 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 BCL2L13Q9BXK5 485 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 TNFRSF10DQ9UBN6 386 aa4.12□□□□□ -1.75
CEP290-204ENST00000547926 DBHP09172 617 aa4.11□□□□□ -1.75
CEP290-204ENST00000547926 CTSKP43235 329 aa4.11□□□□□ -1.75
CEP290-204ENST00000547926 CCDC85BQ15834 202 aaPredicted RBP4.11□□□□□ -1.75
CEP290-204ENST00000547926 ZNF655Q8N720 491 aaPredicted RBP4.11□□□□□ -1.75
CEP290-204ENST00000547926 CHST13Q8NET6 341 aa4.11□□□□□ -1.75
CEP290-204ENST00000547926 GIPC2Q8TF65 315 aa4.11□□□□□ -1.75
CEP290-204ENST00000547926 AP5S1Q9NUS5 200 aa4.11□□□□□ -1.75
CEP290-204ENST00000547926 INVSQ9Y283 1065 aa4.11□□□□□ -1.75
CEP290-204ENST00000547926 SSU72P8A0A1W2PR75 194 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 SORBS3O60504 671 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 UBOX5O94941 541 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 ASGR2P07307 311 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 LIG3P49916 1009 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 YARSP54577 528 aaKnown RBP4.1□□□□□ -1.75
CEP290-204ENST00000547926 PRR5P85299 388 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 LAPTM5Q13571 262 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 TMEM201Q5SNT2 666 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 BNC2Q6ZN30 1099 aaPredicted RBP4.1□□□□□ -1.75
CEP290-204ENST00000547926 MIR1-1HGQ9H1L0 117 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 C11orf21Q9P2W6 132 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 REV1Q9UBZ9 1251 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 TSC22D4Q9Y3Q8 395 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 RPS26P62854 115 aaKnown RBP4.1□□□□□ -1.75
CEP290-204ENST00000547926 TSNAXIP1Q2TAA8 658 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 ENOX1Q8TC92 643 aaKnown RBP4.1□□□□□ -1.75
CEP290-204ENST00000547926 CDADC1Q9BWV3 514 aa4.1□□□□□ -1.75
CEP290-204ENST00000547926 TMEM62Q0P6H9 643 aa4.09□□□□□ -1.75
CEP290-204ENST00000547926 NBPF9Q3BBW0 867 aa4.09□□□□□ -1.75
CEP290-204ENST00000547926 ZNF512BQ96KM6 892 aaPredicted RBP4.09□□□□□ -1.75
CEP290-204ENST00000547926 CCDC74BQ96LY2 380 aa4.09□□□□□ -1.75
CEP290-204ENST00000547926 MRS2Q9HD23 443 aa4.09□□□□□ -1.75
CEP290-204ENST00000547926 VTI1BQ9UEU0 232 aa4.09□□□□□ -1.75
CEP290-204ENST00000547926 POLR3KQ9Y2Y1 108 aaPredicted RBP4.09□□□□□ -1.75
CEP290-204ENST00000547926 TACR1P25103 407 aa4.09□□□□□ -1.76
CEP290-204ENST00000547926 POLR2BP30876 1174 aaKnown RBP4.09□□□□□ -1.76
CEP290-204ENST00000547926 SMAD4Q13485 552 aaKnown RBP4.09□□□□□ -1.76
CEP290-204ENST00000547926 TAF1CQ15572 869 aaPredicted RBP4.09□□□□□ -1.76
CEP290-204ENST00000547926 ZNF585AQ6P3V2 769 aa4.09□□□□□ -1.76
CEP290-204ENST00000547926 ZNF575Q86XF7 245 aa4.09□□□□□ -1.76
CEP290-204ENST00000547926 PHACTR4Q8IZ21 702 aa4.09□□□□□ -1.76
CEP290-204ENST00000547926 ADAMTS17Q8TE56 1095 aa4.09□□□□□ -1.76
CEP290-204ENST00000547926 ASCC2Q9H1I8 757 aaPredicted RBP4.09□□□□□ -1.76
CEP290-204ENST00000547926 FAN1Q9Y2M0 1017 aa4.09□□□□□ -1.76
CEP290-204ENST00000547926 USP31Q70CQ4 1352 aa4.08□□□□□ -1.76
CEP290-204ENST00000547926 ZNF16P17020 682 aaPredicted RBP4.08□□□□□ -1.76
CEP290-204ENST00000547926 TARBP2Q15633 366 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms