RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TRMT44Q8IYL2 757 aaKnown RBP13.83□□□□□ -0.2
LTBR-214ENST00000545445 PNMA1Q8ND90 353 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 MYLIPQ8WY64 445 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 USP6NLQ92738 828 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.2
LTBR-214ENST00000545445 SENP6Q9GZR1 1112 aaPredicted RBP13.83□□□□□ -0.2
LTBR-214ENST00000545445 PORCNQ9H237 461 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 CDH23Q9H251 3354 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 TTC28Q96AY4 2481 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 ST18O60284 1047 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 CALM1P0DP23 149 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 CALM2P0DP24 149 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 CALM3P0DP25 149 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 CPA1P15085 419 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 MAPK4P31152 587 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 RGS2P41220 211 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 RCAN1P53805 252 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 DCAF4Q8WV16 495 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 MAP3K14Q99558 947 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 APBA2Q99767 749 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 PAGR1Q9BTK6 254 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 LRRC2Q9BYS8 371 aa13.82□□□□□ -0.2
LTBR-214ENST00000545445 WDR46O15213 610 aaKnown RBP13.81□□□□□ -0.2
LTBR-214ENST00000545445 DDAH1O94760 285 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 EVCP57679 992 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
LTBR-214ENST00000545445 C9orf50Q5SZB4 431 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 MORN1Q5T089 497 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 SLFN13Q68D06 897 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 GPR142Q7Z601 462 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 CCAR1Q8IX12 1150 aaKnown RBP13.81□□□□□ -0.2
LTBR-214ENST00000545445 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
LTBR-214ENST00000545445 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 TCEANC2Q96MN5 208 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 SEMA6BQ9H3T3 888 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 EMILIN3Q9NT22 766 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
LTBR-214ENST00000545445 NDUFB10O96000 172 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 SLC1A4P43007 532 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 MCM2P49736 904 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 RTP1P59025 263 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 ERVK-24P63145 666 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 PPP2R5BQ15173 497 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 SHHQ15465 462 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 ZYXQ15942 572 aaKnown RBP13.8□□□□□ -0.2
LTBR-214ENST00000545445 Q3C1V9 767 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
LTBR-214ENST00000545445 PLEKHH3Q7Z736 793 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 BRF1Q92994 677 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 TTYH1Q9H313 450 aaPredicted RBP13.8□□□□□ -0.2
LTBR-214ENST00000545445 PRKAG2Q9UGJ0 569 aa13.8□□□□□ -0.2
LTBR-214ENST00000545445 RAD21O60216 631 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 PDHBP11177 359 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 BMP3P12645 472 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 FOSL2P15408 326 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 VCAM1P19320 739 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
LTBR-214ENST00000545445 KIF5BP33176 963 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 TROAPQ12815 778 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
LTBR-214ENST00000545445 ASPRV1Q53RT3 343 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 ZNF274Q96GC6 653 aaPredicted RBP13.79□□□□□ -0.2
LTBR-214ENST00000545445 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
LTBR-214ENST00000545445 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
LTBR-214ENST00000545445 FLRT1Q9NZU1 646 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 ATP11BQ9Y2G3 1177 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
LTBR-214ENST00000545445 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 ZBTB43O43298 467 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 PLA2G6O60733 806 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 PARP1P09874 1014 aaKnown RBP13.78□□□□□ -0.2
LTBR-214ENST00000545445 GNAQP50148 359 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 AK2P54819 239 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 SPICE1Q8N0Z3 855 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
LTBR-214ENST00000545445 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 PRDM5Q9NQX1 630 aaPredicted RBP13.78□□□□□ -0.2
LTBR-214ENST00000545445 DDX20Q9UHI6 824 aaKnown RBP13.78□□□□□ -0.2
LTBR-214ENST00000545445 FEM1BQ9UK73 627 aa13.78□□□□□ -0.2
LTBR-214ENST00000545445 DNM1LO00429 736 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms