RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 SCNN1BP51168 640 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 ROR2Q01974 943 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 FKBP5Q13451 457 aaPredicted RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 WASHC4Q2M389 1173 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 SYCP3Q8IZU3 236 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 SMARCC2Q8TAQ2 1214 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 GTF3C6Q969F1 213 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PARD6BQ9BYG5 372 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 ZSCAN16Q9H4T2 348 aaPredicted RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 USP19O94966 1318 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 F6X3S4 739 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 RTN2O75298 545 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 ATF7P17544 494 aaPredicted RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 HNRNPH1P31943 449 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 MRPS35P82673 323 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 NFX1Q12986 1120 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 ARHGAP45Q92619 1136 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 API5Q9BZZ5 524 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 ZNF711Q9Y462 761 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 MAGED1Q9Y5V3 778 aaPredicted RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 TNS3Q68CZ2 1445 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 KIF1AQ12756 1690 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 ZBED4O75132 1171 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 NLRP12P59046 1061 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 SCRN1Q12765 414 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 NBPF14Q5TI25 921 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 MTHFD1LQ6UB35 978 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 TMCO3Q6UWJ1 677 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 C8orf48Q96LL4 319 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 BICC1Q9H694 974 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 TTLL3Q9Y4R7 772 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.87□□□□□ -1.31
LMO3-225ENST00000541295 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
LMO3-225ENST00000541295 RGPD2P0DJD1 1756 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 CRB1P82279 1406 aa6.87□□□□□ -1.31
LMO3-225ENST00000541295 M0QX08 132 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 NDUFB5O43674 189 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 CD9P21926 228 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 EPS15P42566 896 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 GCLCP48506 637 aaPredicted RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 BPIFB3P59826 476 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 GPSM2P81274 684 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 RC3H1Q5TC82 1133 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 ARHGAP27Q6ZUM4 889 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 G2E3Q7L622 706 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 VPS52Q8N1B4 723 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 FAM163AQ96GL9 167 aaPredicted RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 DCCP43146 1447 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 SPATA31A3Q5VYP0 1347 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 GOLGA6L7A0A1B0GV03 622 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TSPY2A6NKD2 308 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 PDLIM1O00151 329 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 POLR3GO15318 223 aaPredicted RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 KCNQ3O43525 872 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 FOXD2O60548 495 aaPredicted RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 TSPY3P0CV98 308 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TSPY8P0CW00 308 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 KRT13P13646 458 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TSPY1Q01534 308 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 DYNC1I2Q13409 638 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 ARMC4Q5T2S8 1044 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 JAZF1Q86VZ6 243 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 LILRB1Q8NHL6 650 aaPredicted RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 STRCQ7RTU9 1775 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TRIM64A6NGJ6 449 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TRIM64BA6NI03 449 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 LRRC10BA6NIK2 292 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 SPDYE3A6NKU9 549 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 ANXA1P04083 346 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 FESP07332 822 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 GPTP24298 496 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 SKIV2L2P42285 1042 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 TUFMP49411 452 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 COPAP53621 1224 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 FAPQ12884 760 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 GRM1Q13255 1194 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 TOM1L2Q6ZVM7 507 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 BEND5Q7L4P6 421 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 RNF10Q8N5U6 811 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 MGARPQ8TDB4 240 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 CCT7Q99832 543 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 SRRTQ9BXP5 876 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 CCDC113Q9H0I3 377 aa6.86□□□□□ -1.31
LMO3-225ENST00000541295 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 NOSIPQ9Y314 301 aaKnown RBP6.86□□□□□ -1.31
LMO3-225ENST00000541295 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 hCG_1984214I3L0E3 225 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 DNAJC6O75061 913 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 TADA3O75528 432 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 GNALP38405 381 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 LMAN1P49257 510 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 PPIDQ08752 370 aaKnown RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 CCDC38Q502W7 563 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 ZC3H12BQ5HYM0 836 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms