RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TNMDQ9H2S6 317 aa28.07■■■□□ 2.08
TTC3-225ENST00000540756 VCPKMTQ9H867 229 aa28.07■■■□□ 2.08
TTC3-225ENST00000540756 ADARB2Q9NS39 739 aaKnown RBP28.07■■■□□ 2.08
TTC3-225ENST00000540756 XRCC6P12956 609 aaKnown RBP eCLIP28.06■■■□□ 2.083e-6■■□□□ 14.4
TTC3-225ENST00000540756 GNA11P29992 359 aa28.06■■■□□ 2.08
TTC3-225ENST00000540756 MCM7P33993 719 aa28.06■■■□□ 2.08
TTC3-225ENST00000540756 SYDE2Q5VT97 1194 aa28.06■■■□□ 2.08
TTC3-225ENST00000540756 JAKMIP3Q5VZ66 844 aa28.06■■■□□ 2.08
TTC3-225ENST00000540756 CTNND1O60716 968 aaKnown RBP28.06■■■□□ 2.08
TTC3-225ENST00000540756 PTPREP23469 700 aa28.06■■■□□ 2.08
TTC3-225ENST00000540756 SSC5DA1L4H1 1573 aa28.05■■■□□ 2.08
TTC3-225ENST00000540756 ESYT2A0FGR8 921 aa28.05■■■□□ 2.08
TTC3-225ENST00000540756 hCG_1984214I3L0E3 225 aa28.05■■■□□ 2.08
TTC3-225ENST00000540756 CUTAO60888 179 aa28.05■■■□□ 2.08
TTC3-225ENST00000540756 PTGDRQ13258 359 aa28.05■■■□□ 2.08
TTC3-225ENST00000540756 FAM177A1Q8N128 213 aaPredicted RBP28.05■■■□□ 2.08
TTC3-225ENST00000540756 ZNF713Q8N859 430 aaPredicted RBP28.05■■■□□ 2.08
TTC3-225ENST00000540756 CEP131Q9UPN4 1083 aa28.05■■■□□ 2.08
TTC3-225ENST00000540756 BTNL9Q6UXG8 535 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 PRR12Q9ULL5 1215 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 TRAPPC10P48553 1259 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 ADCY7P51828 1080 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 UBE2SQ16763 222 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 RESP18Q5W5W9 173 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 WRNIP1Q96S55 665 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 FUCA2Q9BTY2 467 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 PCDHA1Q9Y5I3 950 aa28.04■■■□□ 2.08
TTC3-225ENST00000540756 LETM1O95202 739 aaPredicted RBP28.03■■■□□ 2.08
TTC3-225ENST00000540756 PRKG1Q13976 671 aa28.03■■■□□ 2.08
TTC3-225ENST00000540756 MAP3K11Q16584 847 aa28.03■■■□□ 2.08
TTC3-225ENST00000540756 DCAF15Q66K64 600 aa28.03■■■□□ 2.08
TTC3-225ENST00000540756 REXO1Q8N1G1 1221 aaKnown RBP28.03■■■□□ 2.08
TTC3-225ENST00000540756 ERCC4Q92889 916 aaPredicted RBP28.03■■■□□ 2.08
TTC3-225ENST00000540756 FEZ1Q99689 392 aa28.03■■■□□ 2.08
TTC3-225ENST00000540756 SRPRBQ9Y5M8 271 aaKnown RBP28.03■■■□□ 2.08
TTC3-225ENST00000540756 STAT2P52630 851 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 USP49Q70CQ1 688 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 PANK2Q9BZ23 570 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 CSRNP2Q9H175 543 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 TSPY26PQ9H489 355 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 ZNF112Q9UJU3 913 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 HPSEQ9Y251 543 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 KINO60870 393 aaKnown RBP28.02■■■□□ 2.08
TTC3-225ENST00000540756 SAMD1Q6SPF0 538 aaPredicted RBP28.02■■■□□ 2.08
TTC3-225ENST00000540756 FBXO28Q9NVF7 368 aa28.02■■■□□ 2.08
TTC3-225ENST00000540756 DOCK1Q14185 1865 aa28.01■■■□□ 2.08
TTC3-225ENST00000540756 ADM5C9JUS6 153 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 ZNF202O95125 648 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 ATP2C1P98194 919 aaPredicted RBP28.01■■■□□ 2.07
TTC3-225ENST00000540756 USH1GQ495M9 461 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 RNF214Q8ND24 703 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 RIC8AQ9NPQ8 531 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 MRE11P49959 708 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 IL17AQ16552 155 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 RBM43Q6ZSC3 357 aaKnown RBP28.01■■■□□ 2.07
TTC3-225ENST00000540756 SH2D4AQ9H788 454 aa28.01■■■□□ 2.07
TTC3-225ENST00000540756 DPY19L2Q6NUT2 758 aa28■■■□□ 2.07
TTC3-225ENST00000540756 KRT25Q7Z3Z0 450 aa28■■■□□ 2.07
TTC3-225ENST00000540756 C4orf32Q8N8J7 132 aa28■■■□□ 2.07
TTC3-225ENST00000540756 KIFC2Q96AC6 838 aa28■■■□□ 2.07
TTC3-225ENST00000540756 NONOQ15233 471 aaKnown RBP eCLIP27.99■■■□□ 2.075e-9■■■■□ 22.3
TTC3-225ENST00000540756 PPP1R18Q6NYC8 613 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 TBCKQ8TEA7 893 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 PSTPIP2Q9H939 334 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 L1TD1Q5T7N2 865 aaKnown RBP27.99■■■□□ 2.07
TTC3-225ENST00000540756 SCYL3Q8IZE3 742 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 KLRG1Q96E93 195 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 TMEM60Q9H2L4 133 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 PPP2R3BQ9Y5P8 575 aa27.99■■■□□ 2.07
TTC3-225ENST00000540756 USP17L15C9J2P7 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L13C9JLJ4 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L11C9JVI0 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L18D6R9N7 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L22D6RA61 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L17D6RBQ6 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L19D6RCP7 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L20D6RJB6 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 EDIL3O43854 480 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 SYKP43405 635 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L24Q0WX57 530 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 MTMR2Q13614 643 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 USP17L6PQ6QN14 398 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 AMNQ9BXJ7 453 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 PITPNM2Q9BZ72 1349 aa27.98■■■□□ 2.07
TTC3-225ENST00000540756 FAM237AA0A1B0GTK4 181 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 VWA3AA6NCI4 1184 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 CLK2P49760 499 aaKnown RBP27.97■■■□□ 2.07
TTC3-225ENST00000540756 LETM2Q2VYF4 491 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 FBXO11Q86XK2 927 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 CUL5Q93034 780 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 KCNH3Q9ULD8 1083 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 SPP2Q13103 211 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 DCPSQ96C86 337 aaKnown RBP27.97■■■□□ 2.07
TTC3-225ENST00000540756 EPSTI1Q96J88 318 aa27.97■■■□□ 2.07
TTC3-225ENST00000540756 L3MBTL3Q96JM7 780 aaPredicted RBP27.97■■■□□ 2.07
TTC3-225ENST00000540756 MORC2Q9Y6X9 1032 aaPredicted RBP27.97■■■□□ 2.07
TTC3-225ENST00000540756 A0A087WWV3 80 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 BMP15O95972 392 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 PTPRAP18433 802 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 CCDC174Q6PII3 467 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms