RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MARCKSP29966 332 aaPredicted RBP19.29■□□□□ 0.68
COPS3-212ENST00000539941 TTC38Q5R3I4 469 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 ANGEL2Q5VTE6 544 aaKnown RBP19.29■□□□□ 0.68
COPS3-212ENST00000539941 PIK3AP1Q6ZUJ8 805 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 PANK2Q9BZ23 570 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 GOLPH3LQ9H4A5 285 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 PCDHA6Q9UN73 950 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 PCDHA8Q9Y5H6 950 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 FAM237AA0A1B0GTK4 181 aa19.28■□□□□ 0.68
COPS3-212ENST00000539941 CTAGE5O15320 804 aa19.28■□□□□ 0.68
COPS3-212ENST00000539941 RAD21O60216 631 aa19.28■□□□□ 0.68
COPS3-212ENST00000539941 PTPREP23469 700 aa19.28■□□□□ 0.68
COPS3-212ENST00000539941 EPS15P42566 896 aa19.28■□□□□ 0.68
COPS3-212ENST00000539941 RBM43Q6ZSC3 357 aaKnown RBP19.28■□□□□ 0.68
COPS3-212ENST00000539941 KRT25Q7Z3Z0 450 aa19.28■□□□□ 0.68
COPS3-212ENST00000539941 USP17L10C9JJH3 530 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 KINO60870 393 aaKnown RBP19.27■□□□□ 0.68
COPS3-212ENST00000539941 OFD1O75665 1012 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 SLC16A2P36021 539 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 FSTL1Q12841 308 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 SNW1Q13573 536 aaKnown RBP19.27■□□□□ 0.68
COPS3-212ENST00000539941 MAP3K11Q16584 847 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
COPS3-212ENST00000539941 ACER1Q8TDN7 264 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 ZNF341Q9BYN7 854 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 GLT8D2Q9H1C3 349 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 TNMDQ9H2S6 317 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
COPS3-212ENST00000539941 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.68
COPS3-212ENST00000539941 ECE1P42892 770 aa19.27■□□□□ 0.67
COPS3-212ENST00000539941 HS1BP3Q53T59 392 aa19.27■□□□□ 0.67
COPS3-212ENST00000539941 FMR1NBQ8N0W7 255 aaPredicted RBP19.27■□□□□ 0.67
COPS3-212ENST00000539941 ANP32BQ92688 251 aaKnown RBP19.27■□□□□ 0.67
COPS3-212ENST00000539941 TSPY26PQ9H489 355 aa19.27■□□□□ 0.67
COPS3-212ENST00000539941 GGA3Q9NZ52 723 aa19.27■□□□□ 0.67
COPS3-212ENST00000539941 FBXO2Q9UK22 296 aaPredicted RBP19.27■□□□□ 0.67
COPS3-212ENST00000539941 SRPRBQ9Y5M8 271 aaKnown RBP19.27■□□□□ 0.67
COPS3-212ENST00000539941 PLA2G6O60733 806 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 ATP2B1P20020 1258 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 ADCY7P51828 1080 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 NBPF12Q5TAG4 269 aaPredicted RBP19.26■□□□□ 0.67
COPS3-212ENST00000539941 SYDE2Q5VT97 1194 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 RESP18Q5W5W9 173 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
COPS3-212ENST00000539941 FERMT2Q96AC1 680 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 ZNF112Q9UJU3 913 aa19.26■□□□□ 0.67
COPS3-212ENST00000539941 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
COPS3-212ENST00000539941 HIRAP54198 1017 aaPredicted RBP19.25■□□□□ 0.67
COPS3-212ENST00000539941 ATP2C1P98194 919 aaPredicted RBP19.25■□□□□ 0.67
COPS3-212ENST00000539941 CDC37Q16543 378 aaPredicted RBP19.25■□□□□ 0.67
COPS3-212ENST00000539941 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
COPS3-212ENST00000539941 NOM1Q5C9Z4 860 aaKnown RBP19.25■□□□□ 0.67
COPS3-212ENST00000539941 COA7Q96BR5 231 aa19.25■□□□□ 0.67
COPS3-212ENST00000539941 RIC8AQ9NPQ8 531 aa19.25■□□□□ 0.67
COPS3-212ENST00000539941 SCAF8Q9UPN6 1271 aaKnown RBP19.25■□□□□ 0.67
COPS3-212ENST00000539941 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
COPS3-212ENST00000539941 A0A1B0GVL5 298 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 PPP1R11O60927 126 aaPredicted RBP19.24■□□□□ 0.67
COPS3-212ENST00000539941 APLP1P51693 650 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 NDUFA8P51970 172 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 STAT2P52630 851 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 TRAF1Q13077 416 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 ORC2Q13416 577 aaPredicted RBP19.24■□□□□ 0.67
COPS3-212ENST00000539941 NONOQ15233 471 aaKnown RBP eCLIP19.24■□□□□ 0.67
COPS3-212ENST00000539941 SHC4Q6S5L8 630 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 TEX2Q8IWB9 1127 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 RASGRP4Q8TDF6 673 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 PFKFB1P16118 471 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 ZSCAN30Q86W11 494 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 CHURC1Q8WUH1 139 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 CUL5Q93034 780 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 L3MBTL3Q96JM7 780 aaPredicted RBP19.24■□□□□ 0.67
COPS3-212ENST00000539941 TIGD1Q96MW7 591 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 PPP1R9BQ96SB3 815 aa19.24■□□□□ 0.67
COPS3-212ENST00000539941 NUP88Q99567 741 aaPredicted RBP19.24■□□□□ 0.67
COPS3-212ENST00000539941 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 MRPL12P52815 198 aaKnown RBP19.23■□□□□ 0.67
COPS3-212ENST00000539941 RBM10P98175 930 aaKnown RBP19.23■□□□□ 0.67
COPS3-212ENST00000539941 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
COPS3-212ENST00000539941 ZNF174Q15697 407 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 CAMK4Q16566 473 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
COPS3-212ENST00000539941 FAM160B2Q86V87 743 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 DNAJC5GQ8N7S2 189 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 SMC1BQ8NDV3 1235 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 LPAR1Q92633 364 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 FUCA2Q9BTY2 467 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 AMNQ9BXJ7 453 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 KIAA1683Q9H0B3 1180 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 FAM13BQ9NYF5 915 aa19.23■□□□□ 0.67
COPS3-212ENST00000539941 LAD1O00515 517 aa19.22■□□□□ 0.67
COPS3-212ENST00000539941 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
COPS3-212ENST00000539941 CLIC6Q96NY7 704 aa19.22■□□□□ 0.67
COPS3-212ENST00000539941 FEZ1Q99689 392 aa19.22■□□□□ 0.67
COPS3-212ENST00000539941 WNT7AO00755 349 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 ZNF202O95125 648 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms