RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.85■□□□□ 0.45
DDB1-216ENST00000539739 V9GY48 417 aaPredicted RBP17.85■□□□□ 0.45
DDB1-216ENST00000539739 PNMA6FA0A0J9YX94 578 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 PRPF3O43395 683 aaKnown RBP17.84■□□□□ 0.45
DDB1-216ENST00000539739 TLR2O60603 784 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
DDB1-216ENST00000539739 OAZ1P54368 228 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 SNAP25P60880 206 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 ST3GAL1Q11201 340 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 TRAF1Q13077 416 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 CRHR2Q13324 411 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 QRICH1Q2TAL8 776 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 CCDC174Q6PII3 467 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 CPXCR1Q8N123 301 aa17.84■□□□□ 0.45
DDB1-216ENST00000539739 NSUN7Q8NE18 718 aaKnown RBP17.84■□□□□ 0.45
DDB1-216ENST00000539739 BAZ2BQ9UIF8 2168 aaKnown RBP17.84■□□□□ 0.45
DDB1-216ENST00000539739 CTDNEP1O95476 244 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 CUL4AQ13619 759 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 PLS1Q14651 629 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 FBXO11Q86XK2 927 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 ANKRD13CQ8N6S4 541 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 RNF186Q9NXI6 227 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 RBPJLQ9UBG7 517 aa17.83■□□□□ 0.45
DDB1-216ENST00000539739 THSD7BQ9C0I4 1608 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 PTPDC1A2A3K4 754 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 ATP2A1O14983 1001 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 PPFIA3O75145 1194 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 TRPA1O75762 1119 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 ICAM1P05362 532 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.44
DDB1-216ENST00000539739 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.44
DDB1-216ENST00000539739 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 REPS2Q8NFH8 660 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 GPRC5AQ8NFJ5 357 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 AMNQ9BXJ7 453 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 RAVER2Q9HCJ3 691 aaKnown RBP17.83■□□□□ 0.44
DDB1-216ENST00000539739 BTBD7Q9P203 1132 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 ORC3Q9UBD5 711 aaPredicted RBP17.83■□□□□ 0.44
DDB1-216ENST00000539739 STK36Q9NRP7 1315 aa17.83■□□□□ 0.44
DDB1-216ENST00000539739 RLFQ13129 1914 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 hCG_1642624A0A1W2PR95 340 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 DEXIO95424 95 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 STAT3P40763 770 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 ERVK-9P63128 1117 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 ERVK-24P63145 666 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 CCNA1P78396 465 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 FAM110CQ1W6H9 321 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 WASF1Q92558 559 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
DDB1-216ENST00000539739 CFHR5Q9BXR6 569 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 TEX13BQ9BXU2 312 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 SPATC1LQ9H0A9 340 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 CPA4Q9UI42 421 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 CCPG1Q9ULG6 757 aa17.82■□□□□ 0.44
DDB1-216ENST00000539739 CNMDO75829 334 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 COPB2P35606 906 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 SLC4A3P48751 1232 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 PFKFB3Q16875 520 aaPredicted RBP17.81■□□□□ 0.44
DDB1-216ENST00000539739 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
DDB1-216ENST00000539739 SMARCC2Q8TAQ2 1214 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 DDX11Q96FC9 970 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 TXNRD2Q9NNW7 524 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 MORF4L1Q9UBU8 362 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 ZNF214Q9UL59 606 aaPredicted RBP17.81■□□□□ 0.44
DDB1-216ENST00000539739 SMC3Q9UQE7 1217 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 KIF3AQ9Y496 699 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 ADGRA2Q96PE1 1338 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 PARP14Q460N5 1801 aa17.81■□□□□ 0.44
DDB1-216ENST00000539739 ZNF536O15090 1300 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 hCG_1984214I3L0E3 225 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 JAK2O60674 1132 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 TBC1D8O95759 1140 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 SLC25A27O95847 323 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 SCG2P13521 617 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 POTEEQ6S8J3 1075 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 CCAR1Q8IX12 1150 aaKnown RBP17.8■□□□□ 0.44
DDB1-216ENST00000539739 ZNF713Q8N859 430 aaPredicted RBP17.8■□□□□ 0.44
DDB1-216ENST00000539739 FAM184AQ8NB25 1140 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 AGBL1Q96MI9 1066 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 ZMYND15Q9H091 742 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 PCDHA1Q9Y5I3 950 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 BCRP11274 1271 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 Q3C1V9 767 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 TKFCQ3LXA3 575 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 USH1GQ495M9 461 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 HEATR3Q7Z4Q2 680 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 RIOX2Q8IUF8 465 aa17.8■□□□□ 0.44
DDB1-216ENST00000539739 ABCB11O95342 1321 aa17.79■□□□□ 0.44
DDB1-216ENST00000539739 ALAS1P13196 640 aa17.79■□□□□ 0.44
DDB1-216ENST00000539739 XBP1P17861 261 aa17.79■□□□□ 0.44
DDB1-216ENST00000539739 PKN1Q16512 942 aa17.79■□□□□ 0.44
DDB1-216ENST00000539739 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
DDB1-216ENST00000539739 PEX10O60683 326 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 PPP1R11O60927 126 aaPredicted RBP17.78■□□□□ 0.44
DDB1-216ENST00000539739 NCAPG2Q86XI2 1143 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 CCDC12Q8WUD4 166 aaPredicted RBP17.78■□□□□ 0.44
DDB1-216ENST00000539739 COA7Q96BR5 231 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 TRERF1Q96PN7 1200 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms