RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 QRICH1Q2TAL8 776 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
PDE4C-204ENST00000539010 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 CCDC12Q8WUD4 166 aaPredicted RBP16.36■□□□□ 0.21
PDE4C-204ENST00000539010 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 AMNQ9BXJ7 453 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 ASCC2Q9H1I8 757 aaPredicted RBP16.36■□□□□ 0.21
PDE4C-204ENST00000539010 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 RLFQ13129 1914 aa16.36■□□□□ 0.21
PDE4C-204ENST00000539010 PDHXO00330 501 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 VWA5AO00534 786 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 DTNBO60941 627 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 GRM1Q13255 1194 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 HEATR3Q7Z4Q2 680 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 ADAMTS5Q9UNA0 930 aa16.35■□□□□ 0.21
PDE4C-204ENST00000539010 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
PDE4C-204ENST00000539010 H3BQV1 296 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 OAZ1P54368 228 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 LBX2Q6XYB7 198 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 CCDC148Q8NFR7 591 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 CAPNS2Q96L46 248 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 BARHL2Q9NY43 387 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 HERVK_113P62684 666 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 PPP1R18Q6NYC8 613 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
PDE4C-204ENST00000539010 PARK7Q99497 189 aaKnown RBP16.34■□□□□ 0.21
PDE4C-204ENST00000539010 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
PDE4C-204ENST00000539010 ICAM1P05362 532 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 SYT1P21579 422 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 SNAP25P60880 206 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
PDE4C-204ENST00000539010 GPKOWQ92917 476 aaPredicted RBP eCLIP16.33■□□□□ 0.2
PDE4C-204ENST00000539010 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 PTPN18Q99952 460 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
PDE4C-204ENST00000539010 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
PDE4C-204ENST00000539010 STXBP3O00186 592 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 STX6O43752 255 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 TM4SF4P48230 202 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 NAPAP54920 295 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 KIF23Q02241 960 aaPredicted RBP16.32■□□□□ 0.2
PDE4C-204ENST00000539010 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
PDE4C-204ENST00000539010 IFNL1Q8IU54 200 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 FBXO18Q8NFZ0 1043 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
PDE4C-204ENST00000539010 COL11A1P12107 1806 aaPredicted RBP16.32■□□□□ 0.2
PDE4C-204ENST00000539010 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 CALML3P27482 149 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
PDE4C-204ENST00000539010 NLRP5P59047 1200 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 NUCB2P80303 420 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 GALNT17Q6IS24 598 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 ABCB11O95342 1321 aa16.31■□□□□ 0.2
PDE4C-204ENST00000539010 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 GNA11P29992 359 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 FOSBP53539 338 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 USH1GQ495M9 461 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 KRT40Q6A162 431 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 COA7Q96BR5 231 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 WDR33Q9C0J8 1336 aaKnown RBP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 MRPL11Q9Y3B7 192 aaKnown RBP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 ZNF536O15090 1300 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 CYP2C8P10632 490 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 DDIT3P35638 169 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 MAP2K2P36507 400 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 STAT3P40763 770 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 TKFCQ3LXA3 575 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 TEX2Q8IWB9 1127 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 PHF20Q9BVI0 1012 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
PDE4C-204ENST00000539010 ZNF214Q9UL59 606 aaPredicted RBP16.3■□□□□ 0.2
PDE4C-204ENST00000539010 A0A0G2JMZ2 1700 aa16.29■□□□□ 0.2
PDE4C-204ENST00000539010 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
PDE4C-204ENST00000539010 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
PDE4C-204ENST00000539010 MMP1P03956 469 aa16.29■□□□□ 0.2
PDE4C-204ENST00000539010 HSPA6P17066 643 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms