RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 COL9A3Q14050 684 aaPredicted RBP10.04□□□□□ -0.8
GGA3-202ENST00000538886 UBE2SQ16763 222 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 LETM2Q2VYF4 491 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 FAM47CQ5HY64 1035 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 ADGRF4Q8IZF3 695 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 MPHOSPH6Q99547 160 aaKnown RBP10.04□□□□□ -0.8
GGA3-202ENST00000538886 C6orf50Q9HD87 102 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 SLC5A4Q9NY91 659 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 NYAP2Q9P242 653 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 RPAP1Q9BWH6 1393 aaPredicted RBP10.04□□□□□ -0.8
GGA3-202ENST00000538886 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 WDR46O15213 610 aaKnown RBP10.03□□□□□ -0.8
GGA3-202ENST00000538886 FCER1AP12319 257 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 ERCC3P19447 782 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 PDIA3P30101 505 aaKnown RBP10.03□□□□□ -0.8
GGA3-202ENST00000538886 MRPL12P52815 198 aaKnown RBP10.03□□□□□ -0.8
GGA3-202ENST00000538886 CRHR2Q13324 411 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 ASPRV1Q53RT3 343 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 LPAR1Q92633 364 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 TMX2Q9Y320 296 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 PDHBP11177 359 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 QRICH1Q2TAL8 776 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 CD99L2Q8TCZ2 262 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 ZHX3Q9H4I2 956 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
GGA3-202ENST00000538886 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 HOXD10P28358 340 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 MB21D2Q8IYB1 491 aaPredicted RBP10.03□□□□□ -0.8
GGA3-202ENST00000538886 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
GGA3-202ENST00000538886 FEM1BQ9UK73 627 aa10.03□□□□□ -0.8
GGA3-202ENST00000538886 BACH1O14867 736 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 FIBPO43427 364 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 ZSCAN20P17040 1043 aaPredicted RBP10.02□□□□□ -0.8
GGA3-202ENST00000538886 PDE4DQ08499 809 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 RASAL3Q86YV0 1011 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 MMP19Q99542 508 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 TEX13BQ9BXU2 312 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.8
GGA3-202ENST00000538886 COL4A5P29400 1685 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 ANKRD31Q8N7Z5 1873 aa10.02□□□□□ -0.8
GGA3-202ENST00000538886 HSPA1AP0DMV8 641 aaKnown RBP10.02□□□□□ -0.81
GGA3-202ENST00000538886 HSPA1BP0DMV9 641 aaKnown RBP10.02□□□□□ -0.81
GGA3-202ENST00000538886 INHBEP58166 350 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 ANTXR2P58335 489 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 SASS6Q6UVJ0 657 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 RNF207Q6ZRF8 634 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 PIK3AP1Q6ZUJ8 805 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 FAM160B2Q86V87 743 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 SCLT1Q96NL6 688 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.81
GGA3-202ENST00000538886 GCOM1H8Y6P7 765 aaPredicted RBP10.02□□□□□ -0.81
GGA3-202ENST00000538886 POLR2MP0CAP2 368 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 CREBRFQ8IUR6 639 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 MYH3P11055 1940 aa10.02□□□□□ -0.81
GGA3-202ENST00000538886 NOP56O00567 594 aaKnown RBP10.01□□□□□ -0.81
GGA3-202ENST00000538886 PDCP20941 246 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 ZNF543Q08ER8 600 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 TRAF1Q13077 416 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 BAATQ14032 418 aaPredicted RBP10.01□□□□□ -0.81
GGA3-202ENST00000538886 NOC3LQ8WTT2 800 aaKnown RBP10.01□□□□□ -0.81
GGA3-202ENST00000538886 KIAA1683Q9H0B3 1180 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 AGTPBP1Q9UPW5 1226 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 NOD1Q9Y239 953 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 IGF2BP3O00425 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
GGA3-202ENST00000538886 LARGE1O95461 756 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 GNA11P29992 359 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 ADCY7P51828 1080 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 SCRN1Q12765 414 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 IFNL1Q8IU54 200 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 CCDC148Q8NFR7 591 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 LIG1P18858 919 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 CDC27P30260 824 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 FCGRTP55899 365 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 FAM173BQ6P4H8 233 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 AFG3L2Q9Y4W6 797 aa10.01□□□□□ -0.81
GGA3-202ENST00000538886 B4DLN1 442 aa10□□□□□ -0.81
GGA3-202ENST00000538886 TBC1D12O60347 775 aa10□□□□□ -0.81
GGA3-202ENST00000538886 ZBTB48P10074 688 aaPredicted RBP10□□□□□ -0.81
GGA3-202ENST00000538886 ELNP15502 786 aa10□□□□□ -0.81
GGA3-202ENST00000538886 MCM7P33993 719 aa10□□□□□ -0.81
GGA3-202ENST00000538886 IGDCC4Q8TDY8 1250 aa10□□□□□ -0.81
GGA3-202ENST00000538886 DCAF4Q8WV16 495 aa10□□□□□ -0.81
GGA3-202ENST00000538886 RMDN3Q96TC7 470 aa10□□□□□ -0.81
GGA3-202ENST00000538886 TMEM106CQ9BVX2 250 aa10□□□□□ -0.81
GGA3-202ENST00000538886 EHMT1Q9H9B1 1298 aa10□□□□□ -0.81
GGA3-202ENST00000538886 COL11A2P13942 1736 aaPredicted RBP10□□□□□ -0.81
GGA3-202ENST00000538886 PHF20L1A8MW92 1017 aa10□□□□□ -0.81
GGA3-202ENST00000538886 HMGN5P82970 282 aaKnown RBP10□□□□□ -0.81
GGA3-202ENST00000538886 GABPAQ06546 454 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms