RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 EPHX2P34913 555 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 PBX1P40424 430 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 SMC1BQ8NDV3 1235 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ARGLU1Q9NWB6 273 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ZNF446Q9NWS9 450 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ARPP21Q9UBL0 812 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ADD3Q9UEY8 706 aaKnown RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 WNT7AO00755 349 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 IGSF3O75054 1194 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 KLRK1P26718 216 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 GNG11P61952 73 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 MAP3K9P80192 1104 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 E2F4Q16254 413 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 TOGARAM2Q6ZUX3 1019 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 G3V3G9 751 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 PSMD14O00487 310 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 KIF5BP33176 963 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 CLCN6P51797 869 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 NLRP5P59047 1200 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
CDCA3-207ENST00000538862 TXNRD3Q86VQ6 643 aa16.44■□□□□ 0.22
CDCA3-207ENST00000538862 SHTN1A0MZ66 631 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 TEX33O43247 280 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 CCDC175P0C221 793 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 CALML3P27482 149 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 FSTL1Q12841 308 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 SH3GLB2Q9NR46 395 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
CDCA3-207ENST00000538862 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
CDCA3-207ENST00000538862 STX17P56962 302 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 FAM193AP78312 1265 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 HTRA3P83110 453 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 TNIP1Q15025 636 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
CDCA3-207ENST00000538862 IGSF22Q8N9C0 903 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 WDR24Q96S15 920 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
CDCA3-207ENST00000538862 LRRC10BA6NIK2 292 aa16.42■□□□□ 0.22
CDCA3-207ENST00000538862 RBL2Q08999 1139 aa16.42■□□□□ 0.22
CDCA3-207ENST00000538862 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
CDCA3-207ENST00000538862 PIK3AP1Q6ZUJ8 805 aa16.42■□□□□ 0.22
CDCA3-207ENST00000538862 BBXQ8WY36 941 aaPredicted RBP16.42■□□□□ 0.22
CDCA3-207ENST00000538862 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
CDCA3-207ENST00000538862 GPRC5DQ9NZD1 345 aa16.42■□□□□ 0.22
CDCA3-207ENST00000538862 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 TSPY2A6NKD2 308 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 ATP8B1O43520 1251 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 NMT2O60551 498 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 FECHP22830 423 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 CASP1P29466 404 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 LONP1P36776 959 aaKnown RBP16.41■□□□□ 0.22
CDCA3-207ENST00000538862 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
CDCA3-207ENST00000538862 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 CNGA4Q8IV77 575 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 FAM177A1Q8N128 213 aaPredicted RBP16.41■□□□□ 0.22
CDCA3-207ENST00000538862 ANKS1AQ92625 1134 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 RMND1Q9NWS8 449 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 RWDD2AQ9UIY3 292 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 SPAG1Q07617 926 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 FAM47AQ5JRC9 791 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 RCSD1Q6JBY9 416 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 DGKHQ86XP1 1220 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 GPR161Q8N6U8 529 aaKnown RBP16.41■□□□□ 0.22
CDCA3-207ENST00000538862 LIMA1Q9UHB6 759 aaKnown RBP16.41■□□□□ 0.22
CDCA3-207ENST00000538862 LEMD3Q9Y2U8 911 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 FHOD1Q9Y613 1164 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 ADGRG1Q9Y653 693 aa16.41■□□□□ 0.22
CDCA3-207ENST00000538862 MFAP3LO75121 409 aa16.4■□□□□ 0.22
CDCA3-207ENST00000538862 ZRANB2O95218 330 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDCA3-207ENST00000538862 IL17AQ16552 155 aa16.4■□□□□ 0.22
CDCA3-207ENST00000538862 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
CDCA3-207ENST00000538862 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
CDCA3-207ENST00000538862 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
CDCA3-207ENST00000538862 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
CDCA3-207ENST00000538862 PSME4Q14997 1843 aa16.4■□□□□ 0.22
CDCA3-207ENST00000538862 SOWAHDA6NJG2 315 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 PRDX5P30044 214 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 MCM7P33993 719 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 PPP2R3AQ06190 1150 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 TERF2Q15554 542 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 ZNF658Q5TYW1 1059 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 RRAGBQ5VZM2 374 aa16.39■□□□□ 0.21
CDCA3-207ENST00000538862 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 RSRC2Q7L4I2 434 aaKnown RBP16.39■□□□□ 0.21
CDCA3-207ENST00000538862 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms