RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TRIM49BA6NDI0 452 aa28.08■■■□□ 2.09
RAB40C-204ENST00000538492 HOXA10P31260 410 aaPredicted RBP28.08■■■□□ 2.09
RAB40C-204ENST00000538492 LRRC15Q8TF66 581 aa28.08■■■□□ 2.09
RAB40C-204ENST00000538492 GOLGA6L9A6NEM1 432 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 POLRMTO00411 1230 aaKnown RBP28.07■■■□□ 2.08
RAB40C-204ENST00000538492 GYPCP04921 128 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 RAD9BQ6WBX8 426 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 CCDC12Q8WUD4 166 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-204ENST00000538492 MRPL44Q9H9J2 332 aaKnown RBP28.07■■■□□ 2.08
RAB40C-204ENST00000538492 C6orf50Q9HD87 102 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 LIMA1Q9UHB6 759 aaKnown RBP28.07■■■□□ 2.08
RAB40C-204ENST00000538492 FRMPD2Q68DX3 1309 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-204ENST00000538492 KCNJ18B7U540 433 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 MFAP3LO75121 409 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 FXR1P51114 621 aaKnown RBP eCLIP28.07■■■□□ 2.08
RAB40C-204ENST00000538492 KCNJ12Q14500 433 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 NONOQ15233 471 aaKnown RBP eCLIP28.07■■■□□ 2.081e-6■■■■□ 24.9
RAB40C-204ENST00000538492 TCP11X2Q5H9J9 407 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 FEZ1Q99689 392 aa28.07■■■□□ 2.08
RAB40C-204ENST00000538492 EIF6P56537 245 aaKnown RBP28.06■■■□□ 2.08
RAB40C-204ENST00000538492 LAD1O00515 517 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 COPB1P53618 953 aaKnown RBP28.06■■■□□ 2.08
RAB40C-204ENST00000538492 SOGA3Q5TF21 947 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 KRT25Q7Z3Z0 450 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 CCSER1Q9C0I3 900 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 BIN2Q9UBW5 565 aaPredicted RBP28.06■■■□□ 2.08
RAB40C-204ENST00000538492 MYH8P13535 1937 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 PRKCSHP14314 528 aaPredicted RBP28.06■■■□□ 2.08
RAB40C-204ENST00000538492 GNA11P29992 359 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 CASQ1P31415 396 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 CLEC10AQ8IUN9 316 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 CRAMP1Q96RY5 1269 aa28.06■■■□□ 2.08
RAB40C-204ENST00000538492 LRRC10BA6NIK2 292 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 CCDC175P0C221 793 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 TXNRD1Q16881 649 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 JAKMIP3Q5VZ66 844 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 PPEF1O14829 653 aaPredicted RBP28.05■■■□□ 2.08
RAB40C-204ENST00000538492 OR52Z1P0C646 297 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 PRPHP41219 470 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 PMS1P54277 932 aaKnown RBP28.05■■■□□ 2.08
RAB40C-204ENST00000538492 ADSSL1Q8N142 457 aa28.05■■■□□ 2.08
RAB40C-204ENST00000538492 LRRC47Q8N1G4 583 aaKnown RBP28.05■■■□□ 2.08
RAB40C-204ENST00000538492 IRX2Q9BZI1 471 aaPredicted RBP28.05■■■□□ 2.08
RAB40C-204ENST00000538492 A0A0U1RQJ8 604 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 SPAG1Q07617 926 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 MNS1Q8NEH6 495 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 ATRIPQ8WXE1 791 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 CARD6Q9BX69 1037 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 LZTFL1Q9NQ48 299 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 KBTBD4Q9NVX7 518 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 TRPC5Q9UL62 973 aaPredicted RBP28.04■■■□□ 2.08
RAB40C-204ENST00000538492 KLRC4O43908 158 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 TRIM37O94972 964 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 PLCG1P19174 1290 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 NEK8Q86SG6 692 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 CABP7Q86V35 215 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 ANKRD20A12PQ8NF67 263 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 TBCKQ8TEA7 893 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 MXD3Q9BW11 206 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 TMEM260Q9NX78 707 aa28.04■■■□□ 2.08
RAB40C-204ENST00000538492 PDHBP11177 359 aa28.03■■■□□ 2.08
RAB40C-204ENST00000538492 CNGA4Q8IV77 575 aa28.03■■■□□ 2.08
RAB40C-204ENST00000538492 NAA15Q9BXJ9 866 aaKnown RBP28.03■■■□□ 2.08
RAB40C-204ENST00000538492 ITIH6Q6UXX5 1313 aa28.03■■■□□ 2.08
RAB40C-204ENST00000538492 TECP42680 631 aa28.03■■■□□ 2.08
RAB40C-204ENST00000538492 DDX41Q9UJV9 622 aaKnown RBP28.03■■■□□ 2.08
RAB40C-204ENST00000538492 ADGRG1Q9Y653 693 aa28.03■■■□□ 2.08
RAB40C-204ENST00000538492 RNF225M0QZC1 329 aaPredicted RBP28.02■■■□□ 2.08
RAB40C-204ENST00000538492 ARHGAP29Q52LW3 1261 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 SLC27A3Q5K4L6 730 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 DDX4Q9NQI0 724 aaKnown RBP28.02■■■□□ 2.08
RAB40C-204ENST00000538492 OGFRQ9NZT2 677 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 GOLGB1Q14789 3259 aaKnown RBP28.02■■■□□ 2.08
RAB40C-204ENST00000538492 TPM1P09493 284 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 AKR1B1P15121 316 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 IRF2BP1Q8IU81 584 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 REXO1Q8N1G1 1221 aaKnown RBP28.02■■■□□ 2.08
RAB40C-204ENST00000538492 MTMR4Q9NYA4 1195 aa28.02■■■□□ 2.08
RAB40C-204ENST00000538492 DPP8Q6V1X1 898 aaPredicted RBP28.01■■■□□ 2.07
RAB40C-204ENST00000538492 CERS5Q8N5B7 392 aa28.01■■■□□ 2.07
RAB40C-204ENST00000538492 COA7Q96BR5 231 aa28.01■■■□□ 2.07
RAB40C-204ENST00000538492 NUP88Q99567 741 aaPredicted RBP28.01■■■□□ 2.07
RAB40C-204ENST00000538492 FOCADQ5VW36 1801 aa28.01■■■□□ 2.07
RAB40C-204ENST00000538492 KCNB1Q14721 858 aa28.01■■■□□ 2.07
RAB40C-204ENST00000538492 SP8Q8IXZ3 490 aa28.01■■■□□ 2.07
RAB40C-204ENST00000538492 KIFC2Q96AC6 838 aa28.01■■■□□ 2.07
RAB40C-204ENST00000538492 H7C1D1 291 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 NOVP48745 357 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 UBXN1Q04323 297 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 POTEDQ86YR6 584 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 UBXN4Q92575 508 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 LTBP1Q14766 1721 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 SCNN1DP51172 638 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 SMAP1Q8IYB5 467 aaPredicted RBP28■■■□□ 2.07
RAB40C-204ENST00000538492 AK8Q96MA6 479 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 SRRTQ9BXP5 876 aaKnown RBP28■■■□□ 2.07
RAB40C-204ENST00000538492 RIOX1Q9H6W3 641 aa28■■■□□ 2.07
RAB40C-204ENST00000538492 TTF2Q9UNY4 1162 aaKnown RBP28■■■□□ 2.07
RAB40C-204ENST00000538492 KLRG2A4D1S0 409 aaPredicted RBP27.99■■■□□ 2.07
RAB40C-204ENST00000538492 RHOBTB3O94955 611 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms