RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 DACT3Q96B18 629 aaPredicted RBP9.18□□□□□ -0.94
CCDC7-208ENST00000537047 IMPACTQ9P2X3 320 aa9.18□□□□□ -0.94
CCDC7-208ENST00000537047 WTIPA6NIX2 430 aaPredicted RBP9.17□□□□□ -0.94
CCDC7-208ENST00000537047 RFXAPO00287 272 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 ZNF16P17020 682 aaPredicted RBP9.17□□□□□ -0.94
CCDC7-208ENST00000537047 NCKAP1LP55160 1127 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
CCDC7-208ENST00000537047 DCAF15Q66K64 600 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 RUFY4Q6ZNE9 571 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 TMC6Q7Z403 805 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 CCDC144CPQ8IYA2 1237 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 C7orf61Q8IZ16 206 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
CCDC7-208ENST00000537047 H0Y8X5 98 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 IRS4O14654 1257 aaPredicted RBP9.16□□□□□ -0.94
CCDC7-208ENST00000537047 MSL3P1P0C860 447 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 CYP4F8P98187 520 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 IGDCC3Q8IVU1 814 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 MZB1Q8WU39 189 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 BRF1Q92994 677 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 DSCC1Q9BVC3 393 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 SLC12A9Q9BXP2 914 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 ACSL6Q9UKU0 697 aa9.16□□□□□ -0.94
CCDC7-208ENST00000537047 MPOP05164 745 aa9.15□□□□□ -0.94
CCDC7-208ENST00000537047 GSTM1P09488 218 aa9.15□□□□□ -0.94
CCDC7-208ENST00000537047 AFF3P51826 1226 aaKnown RBP9.15□□□□□ -0.94
CCDC7-208ENST00000537047 AXDND1Q5T1B0 1012 aaPredicted RBP9.15□□□□□ -0.94
CCDC7-208ENST00000537047 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
CCDC7-208ENST00000537047 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
CCDC7-208ENST00000537047 TNFRSF12AQ9NP84 129 aa9.15□□□□□ -0.94
CCDC7-208ENST00000537047 PPT2Q9UMR5 302 aa9.15□□□□□ -0.94
CCDC7-208ENST00000537047 A0A1W2PQ45 241 aaPredicted RBP9.14□□□□□ -0.95
CCDC7-208ENST00000537047 A0A1W2PQY0 241 aa9.14□□□□□ -0.95
CCDC7-208ENST00000537047 TP53P04637 393 aaPredicted RBP9.14□□□□□ -0.95
CCDC7-208ENST00000537047 INTS3Q68E01 1043 aaKnown RBP9.14□□□□□ -0.95
CCDC7-208ENST00000537047 USP48Q86UV5 1035 aa9.14□□□□□ -0.95
CCDC7-208ENST00000537047 TMEM151BQ8IW70 566 aa9.14□□□□□ -0.95
CCDC7-208ENST00000537047 FOXD2O60548 495 aaPredicted RBP9.13□□□□□ -0.95
CCDC7-208ENST00000537047 ZNF76P36508 570 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 ARL4AP40617 200 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 PMS1P54277 932 aaKnown RBP9.13□□□□□ -0.95
CCDC7-208ENST00000537047 ZNF445P59923 1031 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 FANCCQ00597 558 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 MVKQ03426 396 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 RPTNQ6XPR3 784 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 XYLT2Q9H1B5 865 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 HCFC2Q9Y5Z7 792 aa9.13□□□□□ -0.95
CCDC7-208ENST00000537047 GSNP06396 782 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 LAPTM5Q13571 262 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 FBXW10Q5XX13 1052 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 FAM129CQ86XR2 697 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 FEZF2Q8TBJ5 459 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 DHRS1Q96LJ7 313 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 FERD3LQ96RJ6 166 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 PCDHA5Q9Y5H7 936 aa9.12□□□□□ -0.95
CCDC7-208ENST00000537047 OTOL1A6NHN0 477 aaPredicted RBP9.11□□□□□ -0.95
CCDC7-208ENST00000537047 CNKSR3Q6P9H4 555 aa9.11□□□□□ -0.95
CCDC7-208ENST00000537047 UNC5AQ6ZN44 842 aa9.11□□□□□ -0.95
CCDC7-208ENST00000537047 SYT8Q8NBV8 401 aa9.11□□□□□ -0.95
CCDC7-208ENST00000537047 GP6Q9HCN6 339 aa9.11□□□□□ -0.95
CCDC7-208ENST00000537047 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
CCDC7-208ENST00000537047 ZNF451Q9Y4E5 1061 aa9.11□□□□□ -0.95
CCDC7-208ENST00000537047 ABLIM1O14639 778 aa9.1□□□□□ -0.95
CCDC7-208ENST00000537047 RACK1P63244 317 aaKnown RBP9.1□□□□□ -0.95
CCDC7-208ENST00000537047 PLEKHN1Q494U1 663 aaPredicted RBP9.1□□□□□ -0.95
CCDC7-208ENST00000537047 NAT16Q8N8M0 369 aa9.1□□□□□ -0.95
CCDC7-208ENST00000537047 CBX2Q14781 532 aaPredicted RBP9.09□□□□□ -0.95
CCDC7-208ENST00000537047 NFIXQ14938 502 aa9.09□□□□□ -0.95
CCDC7-208ENST00000537047 NOL9Q5SY16 702 aaKnown RBP9.09□□□□□ -0.95
CCDC7-208ENST00000537047 OLFML2BQ68BL8 750 aa9.09□□□□□ -0.95
CCDC7-208ENST00000537047 ZDHHC14Q8IZN3 488 aa9.09□□□□□ -0.95
CCDC7-208ENST00000537047 FIBCD1Q8N539 461 aa9.09□□□□□ -0.95
CCDC7-208ENST00000537047 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
CCDC7-208ENST00000537047 RTEL1Q9NZ71 1219 aa9.09□□□□□ -0.95
CCDC7-208ENST00000537047 BUB1BO60566 1050 aaPredicted RBP9.08□□□□□ -0.96
CCDC7-208ENST00000537047 IFNGR1P15260 489 aa9.08□□□□□ -0.96
CCDC7-208ENST00000537047 CD247P20963 164 aa9.08□□□□□ -0.96
CCDC7-208ENST00000537047 ENDOUP21128 410 aaKnown RBP9.08□□□□□ -0.96
CCDC7-208ENST00000537047 ZNF200P98182 395 aaPredicted RBP9.08□□□□□ -0.96
CCDC7-208ENST00000537047 CWF19L1Q69YN2 538 aaKnown RBP9.08□□□□□ -0.96
CCDC7-208ENST00000537047 CCDC81Q6ZN84 652 aa9.08□□□□□ -0.96
CCDC7-208ENST00000537047 TAB3Q8N5C8 712 aaPredicted RBP9.08□□□□□ -0.96
CCDC7-208ENST00000537047 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
CCDC7-208ENST00000537047 TM9SF2Q99805 663 aa9.08□□□□□ -0.96
CCDC7-208ENST00000537047 LTBP3Q9NS15 1303 aa9.07□□□□□ -0.96
CCDC7-208ENST00000537047 FGF10O15520 208 aaPredicted RBP9.07□□□□□ -0.96
CCDC7-208ENST00000537047 TACR1P25103 407 aa9.07□□□□□ -0.96
CCDC7-208ENST00000537047 LIMS1P48059 325 aa9.07□□□□□ -0.96
CCDC7-208ENST00000537047 ANKRD39Q53RE8 183 aa9.07□□□□□ -0.96
CCDC7-208ENST00000537047 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
CCDC7-208ENST00000537047 NOL6Q9H6R4 1146 aaKnown RBP9.07□□□□□ -0.96
CCDC7-208ENST00000537047 A0A1W2PQ27 194 aa9.06□□□□□ -0.96
CCDC7-208ENST00000537047 A0A1W2PQ64 194 aa9.06□□□□□ -0.96
CCDC7-208ENST00000537047 A0A1W2PQC6 194 aa9.06□□□□□ -0.96
CCDC7-208ENST00000537047 A0A1W2PQD8 194 aa9.06□□□□□ -0.96
CCDC7-208ENST00000537047 IMPDH2P12268 514 aa9.06□□□□□ -0.96
CCDC7-208ENST00000537047 GUCY2CP25092 1073 aa9.06□□□□□ -0.96
CCDC7-208ENST00000537047 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms