RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 ASCC2Q9H1I8 757 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 RANBP17Q9H2T7 1088 aaKnown RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 ADAMTS5Q9UNA0 930 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 KCNJ14Q9UNX9 436 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 MYH6P13533 1939 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 H3BQV1 296 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 PDHXO00330 501 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 ZBED4O75132 1171 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 OSBPP22059 807 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 PABPC4Q13310 644 aaKnown RBP eCLIP13.29□□□□□ -0.282e-7■■■□□ 15.6
CDCA3-206ENST00000536241 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 TYW1BQ6NUM6 668 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 FBXO11Q86XK2 927 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 AMNQ9BXJ7 453 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 SLC38A10Q9HBR0 1119 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 RAVER2Q9HCJ3 691 aaKnown RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 ZDHHC9Q9Y397 364 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-206ENST00000536241 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-206ENST00000536241 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-206ENST00000536241 STXBP3O00186 592 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 FDX1P10109 184 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-206ENST00000536241 XBP1P17861 261 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 NLRP5P59047 1200 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 HTRA3P83110 453 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 TRIM29Q14134 588 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 USH1GQ495M9 461 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 ANKRD23Q86SG2 305 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 SH3GLB2Q9NR46 395 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 CHMP5Q9NZZ3 219 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 MTMR6Q9Y217 621 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 ZNF536O15090 1300 aa13.28□□□□□ -0.28
CDCA3-206ENST00000536241 SMCHD1A6NHR9 2005 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 SMCO2A6NFE2 343 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 RASSF10A6NK89 507 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 PEX10O60683 326 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 CYP2C8P10632 490 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.29
CDCA3-206ENST00000536241 NAPAP54920 295 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 INHBEP58166 350 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 NUCB2P80303 420 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 KIF23Q02241 960 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-206ENST00000536241 REPS2Q8NFH8 660 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-206ENST00000536241 MYPNQ86TC9 1320 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 RLFQ13129 1914 aa13.27□□□□□ -0.29
CDCA3-206ENST00000536241 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 BRD1O95696 1058 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 MMP1P03956 469 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 ICAM1P05362 532 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 HERVK_113P62684 666 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 LBX2Q6XYB7 198 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 CAPNS2Q96L46 248 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 SLC45A1Q9Y2W3 748 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 LOC285556D6RIA3 1793 aa13.26□□□□□ -0.29
CDCA3-206ENST00000536241 BTBD18B2RXH4 712 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 hCG_1984214I3L0E3 225 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDCA3-206ENST00000536241 AOC2O75106 756 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 ZSCAN22P10073 491 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-206ENST00000536241 TM4SF4P48230 202 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 PLS1Q14651 629 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 FERMT3Q86UX7 667 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 ZNF713Q8N859 430 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-206ENST00000536241 PAGR1Q9BTK6 254 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 PNMA3Q9UL41 463 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 RIPK3Q9Y572 518 aa13.25□□□□□ -0.29
CDCA3-206ENST00000536241 WDR33Q9C0J8 1336 aaKnown RBP13.25□□□□□ -0.29
CDCA3-206ENST00000536241 PARP14Q460N5 1801 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 ALAS1P13196 640 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 STAT3P40763 770 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 TRAF1Q13077 416 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 NPY5RQ15761 445 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 Q3C1V9 767 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 RGS22Q8NE09 1264 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-206ENST00000536241 TBC1D5Q92609 795 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
CDCA3-206ENST00000536241 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms