RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 SYDE2Q5VT97 1194 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 CLIC6Q96NY7 704 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 FUCA2Q9BTY2 467 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 GLT8D2Q9H1C3 349 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 RBSNQ9H1K0 784 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 VCPKMTQ9H867 229 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 FAM13BQ9NYF5 915 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 HPSEQ9Y251 543 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 TMEM232C9JQI7 657 aa27.15■■□□□ 1.94
PTPMT1-205ENST00000534775 CDC37Q16543 378 aaPredicted RBP27.15■■□□□ 1.94
PTPMT1-205ENST00000534775 NUP88Q99567 741 aaPredicted RBP27.15■■□□□ 1.94
PTPMT1-205ENST00000534775 ZNF341Q9BYN7 854 aa27.15■■□□□ 1.94
PTPMT1-205ENST00000534775 SYKP43405 635 aa27.14■■□□□ 1.94
PTPMT1-205ENST00000534775 ATP2C1P98194 919 aaPredicted RBP27.14■■□□□ 1.94
PTPMT1-205ENST00000534775 QRICH1Q2TAL8 776 aa27.14■■□□□ 1.94
PTPMT1-205ENST00000534775 TIGD1Q96MW7 591 aa27.14■■□□□ 1.94
PTPMT1-205ENST00000534775 RIC8AQ9NPQ8 531 aa27.14■■□□□ 1.94
PTPMT1-205ENST00000534775 GGA3Q9NZ52 723 aa27.14■■□□□ 1.94
PTPMT1-205ENST00000534775 PITPNM2Q9BZ72 1349 aa27.14■■□□□ 1.93
PTPMT1-205ENST00000534775 PPP1R11O60927 126 aaPredicted RBP27.13■■□□□ 1.93
PTPMT1-205ENST00000534775 DDNO94850 711 aaPredicted RBP27.13■■□□□ 1.93
PTPMT1-205ENST00000534775 ZNF202O95125 648 aa27.13■■□□□ 1.93
PTPMT1-205ENST00000534775 NBPF12Q5TAG4 269 aaPredicted RBP27.13■■□□□ 1.93
PTPMT1-205ENST00000534775 C9orf131Q5VYM1 1079 aa27.13■■□□□ 1.93
PTPMT1-205ENST00000534775 ADARB2Q9NS39 739 aaKnown RBP27.13■■□□□ 1.93
PTPMT1-205ENST00000534775 STAT2P52630 851 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 MRPL12P52815 198 aaKnown RBP27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 PTGDRQ13258 359 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 CKAP2LQ8IYA6 745 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 SPICE1Q8N0Z3 855 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 CUL5Q93034 780 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 SDF4Q9BRK5 362 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 DOCK1Q14185 1865 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 WNT7AO00755 349 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 MCM7P33993 719 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 TRAF1Q13077 416 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 INF2Q27J81 1249 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 SASS6Q6UVJ0 657 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 AMNQ9BXJ7 453 aa27.12■■□□□ 1.93
PTPMT1-205ENST00000534775 PLA2G6O60733 806 aa27.11■■□□□ 1.93
PTPMT1-205ENST00000534775 ARL6IP4Q66PJ3 421 aaKnown RBP27.11■■□□□ 1.93
PTPMT1-205ENST00000534775 CHURC1Q8WUH1 139 aa27.11■■□□□ 1.93
PTPMT1-205ENST00000534775 FEZ1Q99689 392 aa27.11■■□□□ 1.93
PTPMT1-205ENST00000534775 PCDHA1Q9Y5I3 950 aa27.11■■□□□ 1.93
PTPMT1-205ENST00000534775 HIRAP54198 1017 aaPredicted RBP27.1■■□□□ 1.93
PTPMT1-205ENST00000534775 ORC2Q13416 577 aaPredicted RBP27.1■■□□□ 1.93
PTPMT1-205ENST00000534775 BIN2Q9UBW5 565 aaPredicted RBP27.1■■□□□ 1.93
PTPMT1-205ENST00000534775 KCNH3Q9ULD8 1083 aa27.1■■□□□ 1.93
PTPMT1-205ENST00000534775 LAD1O00515 517 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 TYRO3Q06418 890 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 FAM83BQ5T0W9 1011 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 NEK8Q86SG6 692 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 FAM160B2Q86V87 743 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 FBXO11Q86XK2 927 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 CSRNP2Q9H175 543 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 PSTPIP2Q9H939 334 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 ZNF112Q9UJU3 913 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 PRR12Q9ULL5 1215 aa27.09■■□□□ 1.93
PTPMT1-205ENST00000534775 KIAA1755Q5JYT7 1200 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 JAKMIP3Q5VZ66 844 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 DPY19L2Q6NUT2 758 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 MRVI1Q9Y6F6 885 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 GRIN1Q05586 938 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 SUPT20HL1Q3ZLR7 823 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 ANP32BQ92688 251 aaKnown RBP27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 FEM1BQ9UK73 627 aa27.08■■□□□ 1.93
PTPMT1-205ENST00000534775 ZYXQ15942 572 aaKnown RBP27.07■■□□□ 1.92
PTPMT1-205ENST00000534775 MCTP2Q6DN12 878 aa27.07■■□□□ 1.92
PTPMT1-205ENST00000534775 LPAR1Q92633 364 aa27.07■■□□□ 1.92
PTPMT1-205ENST00000534775 KIAA1683Q9H0B3 1180 aa27.07■■□□□ 1.92
PTPMT1-205ENST00000534775 CLK2P49760 499 aaKnown RBP27.06■■□□□ 1.92
PTPMT1-205ENST00000534775 SCYL3Q8IZE3 742 aa27.06■■□□□ 1.92
PTPMT1-205ENST00000534775 TBCKQ8TEA7 893 aa27.06■■□□□ 1.92
PTPMT1-205ENST00000534775 GLIS2Q9BZE0 524 aaPredicted RBP27.06■■□□□ 1.92
PTPMT1-205ENST00000534775 TMEM260Q9NX78 707 aa27.06■■□□□ 1.92
PTPMT1-205ENST00000534775 INPP5BP32019 993 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 TEX2Q8IWB9 1127 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 C4orf32Q8N8J7 132 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 RNF214Q8ND24 703 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 AS3MTQ9HBK9 375 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 ZC3H4Q9UPT8 1303 aaKnown RBP27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 VWA3AA6NCI4 1184 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 CAVIN2O95810 425 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 PRPHP41219 470 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 LETM2Q2VYF4 491 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 SPECC1Q5M775 1068 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 ELOA2Q8IYF1 753 aaPredicted RBP27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 WRNIP1Q96S55 665 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 PICK1Q9NRD5 415 aa27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 HOOK1Q9UJC3 728 aaKnown RBP27.05■■□□□ 1.92
PTPMT1-205ENST00000534775 WDR46O15213 610 aaKnown RBP27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 CCNT1O60563 726 aaKnown RBP27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 LONP1P36776 959 aaKnown RBP27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 GPR162Q16538 588 aa27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 UVSSAQ2YD98 709 aa27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 CCDC84Q86UT8 332 aaPredicted RBP27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 DCPSQ96C86 337 aaKnown RBP27.04■■□□□ 1.92
PTPMT1-205ENST00000534775 USP14P54578 494 aa27.03■■□□□ 1.92
PTPMT1-205ENST00000534775 KRBA2Q6ZNG9 492 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms