RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
CMTM1-217ENST00000533666 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-217ENST00000533666 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
CMTM1-217ENST00000533666 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 SHCBP1Q8NEM2 672 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
CMTM1-217ENST00000533666 MROH8Q9H579 483 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 ADD1P35611 737 aaKnown RBP16.31■□□□□ 0.2
CMTM1-217ENST00000533666 FCGRTP55899 365 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
CMTM1-217ENST00000533666 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 RAVER2Q9HCJ3 691 aaKnown RBP16.31■□□□□ 0.2
CMTM1-217ENST00000533666 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-217ENST00000533666 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
CMTM1-217ENST00000533666 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-217ENST00000533666 CNMDO75829 334 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 GNRH1P01148 92 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 IFNAR1P17181 557 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 HOXD10P28358 340 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 CDC27P30260 824 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 SLC4A3P48751 1232 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
CMTM1-217ENST00000533666 QRICH1Q2TAL8 776 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 R3HDMLQ9H3Y0 253 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 TXNRD2Q9NNW7 524 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
CMTM1-217ENST00000533666 ABCB11O95342 1321 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 hCG_1984214I3L0E3 225 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 STRNO43815 780 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 SCRN1Q12765 414 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 ME3Q16798 604 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 ZNF713Q8N859 430 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 COA7Q96BR5 231 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 PIGSQ96S52 555 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 RNF26Q9BY78 433 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 MAF1Q9H063 256 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
CMTM1-217ENST00000533666 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
CMTM1-217ENST00000533666 TNPO2O14787 897 aaKnown RBP16.28■□□□□ 0.2
CMTM1-217ENST00000533666 FOXN1O15353 648 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
CMTM1-217ENST00000533666 CYTH3O43739 400 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 ALAS1P13196 640 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 ERCC3P19447 782 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 SNAP25P60880 206 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 Q3C1V9 767 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 HSCBQ8IWL3 235 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
CMTM1-217ENST00000533666 ZNF296Q8WUU4 475 aaPredicted RBP16.28■□□□□ 0.2
CMTM1-217ENST00000533666 PIBF1Q8WXW3 757 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 WASF1Q92558 559 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 LLPHQ9BRT6 129 aaKnown RBP16.28■□□□□ 0.2
CMTM1-217ENST00000533666 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 ACAD9Q9H845 621 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
CMTM1-217ENST00000533666 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
CMTM1-217ENST00000533666 ZNF536O15090 1300 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 CNTNAP5Q8WYK1 1306 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.2
CMTM1-217ENST00000533666 FCER1AP12319 257 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 PSMC4P43686 418 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 KCTD2Q14681 263 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 USH1GQ495M9 461 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 PLEKHH3Q7Z736 793 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 MCF2L2Q86YR7 1114 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 ABRAQ8N0Z2 381 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
CMTM1-217ENST00000533666 SNX21Q969T3 373 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 TRERF1Q96PN7 1200 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 RNF146Q9NTX7 359 aa16.27■□□□□ 0.2
CMTM1-217ENST00000533666 SLC5A4Q9NY91 659 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms