RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 LOC102724159A0A0B4J2E5 919 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 CDC45O75419 566 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 ICAM1P05362 532 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 CYBAP13498 195 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 PWP2Q15269 919 aaKnown RBP11.54□□□□□ -0.56
NUP98-220ENST00000533346 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
NUP98-220ENST00000533346 WDR78Q5VTH9 848 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 STOX1Q6ZVD7 989 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 MB21D2Q8IYB1 491 aaPredicted RBP11.54□□□□□ -0.56
NUP98-220ENST00000533346 DEFB118Q96PH6 123 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 MAP3K14Q99558 947 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 ZKSCAN3Q9BRR0 538 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 RAVER2Q9HCJ3 691 aaKnown RBP11.54□□□□□ -0.56
NUP98-220ENST00000533346 MYH6P13533 1939 aa11.54□□□□□ -0.56
NUP98-220ENST00000533346 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
NUP98-220ENST00000533346 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 IGDCC4Q8TDY8 1250 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 KCNB2Q92953 911 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 TINF2Q9BSI4 451 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 ACAD9Q9H845 621 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 CTDP1Q9Y5B0 961 aaPredicted RBP11.53□□□□□ -0.56
NUP98-220ENST00000533346 SYNGAP1Q96PV0 1343 aa11.53□□□□□ -0.56
NUP98-220ENST00000533346 LCTP09848 1927 aa11.52□□□□□ -0.56
NUP98-220ENST00000533346 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
NUP98-220ENST00000533346 SLC27A2O14975 620 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 SEPT4O43236 478 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
NUP98-220ENST00000533346 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.57
NUP98-220ENST00000533346 RASGRP2Q7LDG7 609 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
NUP98-220ENST00000533346 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 TMTC2Q8N394 836 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 FAM133AQ8N9E0 248 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 MTMR8Q96EF0 704 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 TMEM87BQ96K49 555 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 AGBL1Q96MI9 1066 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.57
NUP98-220ENST00000533346 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 PFASO15067 1338 aa11.52□□□□□ -0.57
NUP98-220ENST00000533346 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
NUP98-220ENST00000533346 CYP2C19P33261 490 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 LIFRP42702 1097 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 ANTXR2P58335 489 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 TROAPQ12815 778 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
NUP98-220ENST00000533346 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 CREB3L3Q68CJ9 461 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 TRPV1Q8NER1 839 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 FGD4Q96M96 766 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 A1CFQ9NQ94 594 aaKnown RBP11.51□□□□□ -0.57
NUP98-220ENST00000533346 RNF146Q9NTX7 359 aa11.51□□□□□ -0.57
NUP98-220ENST00000533346 MCM3APO60318 1980 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 ERICH2A1L162 156 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 PARP1P09874 1014 aaKnown RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 ZNF865P0CJ78 1059 aaPredicted RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 COL6A1P12109 1028 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 MCM5P33992 734 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 SLC16A2P36021 539 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 NKX3-2P78367 333 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 GHRHRQ02643 423 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 GRM4Q14833 912 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 RIOX1Q9H6W3 641 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 MAP3K20Q9NYL2 800 aaKnown RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
NUP98-220ENST00000533346 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
NUP98-220ENST00000533346 IFIT3O14879 490 aaKnown RBP11.49□□□□□ -0.57
NUP98-220ENST00000533346 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
NUP98-220ENST00000533346 SNAI1O95863 264 aaPredicted RBP11.49□□□□□ -0.57
NUP98-220ENST00000533346 PGK2P07205 417 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUP98-220ENST00000533346 WTAPQ15007 396 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 NECAB2Q7Z6G3 386 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 ADGRF4Q8IZF3 695 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 FBXL16Q8N461 479 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 CLEC4DQ8WXI8 215 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 KATNBL1Q9H079 304 aa11.49□□□□□ -0.57
NUP98-220ENST00000533346 ABHD16BQ9H3Z7 469 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms