RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SYNE4Q8N205 404 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 STMN2Q93045 179 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 SERTAD1Q9UHV2 236 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 SMIM23A6NLE4 172 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 TNFAIP3P21580 790 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 NLRP12P59046 1061 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 PLCB4Q15147 1175 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 SEPT14Q6ZU15 432 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 GPBP1Q86WP2 473 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 AMNQ9BXJ7 453 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 KRT19P08727 400 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 SCRN1Q12765 414 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 PPP2R5CQ13362 524 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 HACE1Q8IYU2 909 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 DEPTORQ8TB45 409 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 CAPZA3Q96KX2 299 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 NUF2Q9BZD4 464 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 BTBD18B2RXH4 712 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 OR52Z1P0C646 297 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 KCTD2Q14681 263 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 VWA3BQ502W6 1294 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 CCDC25Q86WR0 208 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 RIOK1Q9BRS2 568 aaKnown RBP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 PI4KBQ9UBF8 816 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 NR1I2O75469 434 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 FYB2Q5VWT5 728 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 DYNLL2Q96FJ2 89 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 BAG1Q99933 345 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-232ENST00000532649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.63□□□□□ -0.875e-6■■■□□ 17.3
CTNND1-232ENST00000532649 OATP04181 439 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 PNOCQ13519 176 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 EPHA10Q5JZY3 1008 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 ZNF569Q5MCW4 686 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 LIN9Q5TKA1 542 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 CYP2D7A0A087X1C5 515 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 OSBPP22059 807 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 SLC16A2P36021 539 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 XKR9Q5GH70 373 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 MUM1L1Q5H9M0 696 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 DPP9Q86TI2 863 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 PPFIBP2Q8ND30 876 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 NOX5Q96PH1 765 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-232ENST00000532649 KIF11P52732 1056 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 CALCOCO2Q13137 446 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 ASIC2Q16515 512 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 CEP85LQ5SZL2 805 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 APOA5Q6Q788 366 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 SAMD15Q9P1V8 674 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 CCNA1P78396 465 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 FANCCQ00597 558 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 TRIM14Q14142 442 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 MIPOL1Q8TD10 442 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 USP28Q96RU2 1077 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 TAB2Q9NYJ8 693 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 MINPP1Q9UNW1 487 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 SPATA31A6Q5VVP1 1343 aa9.63□□□□□ -0.87
CTNND1-232ENST00000532649 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 MCAMP43121 646 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 CCDC122Q5T0U0 273 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 KRT26Q7Z3Y9 468 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 RDH13Q8NBN7 331 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 DACT3Q96B18 629 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-232ENST00000532649 NFE2L3Q9Y4A8 694 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 BRD1O95696 1058 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 PFKFB1P16118 471 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 UBXN2AP68543 259 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 ADALQ6DHV7 355 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 TSGA10Q9BZW7 698 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 KCNG1Q9UIX4 513 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 PIK3C2BO00750 1634 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 NRKQ7Z2Y5 1582 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 FOSP01100 380 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-232ENST00000532649 VPS72Q15906 364 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 SIRT2Q8IXJ6 389 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 CELF1Q92879 486 aaKnown RBP9.62□□□□□ -0.87
CTNND1-232ENST00000532649 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 RGS12O14924 1447 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 SNAP23O00161 211 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 BMP3P12645 472 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 CDR2Q01850 454 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 MKRN3Q13064 507 aaKnown RBP9.62□□□□□ -0.87
CTNND1-232ENST00000532649 NAA25Q14CX7 972 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 INTS8Q75QN2 995 aaKnown RBP9.62□□□□□ -0.87
CTNND1-232ENST00000532649 TAOK1Q7L7X3 1001 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
CTNND1-232ENST00000532649 VCX3BQ9H321 246 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 PPME1Q9Y570 386 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 TNNI1P19237 187 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms