RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ACSL6Q9UKU0 697 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 A0A1W2PQ45 241 aaPredicted RBP8.4□□□□□ -1.06
PTPRK-220ENST00000531466 A0A1W2PQY0 241 aa8.4□□□□□ -1.06
PTPRK-220ENST00000531466 ENDOUP21128 410 aaKnown RBP8.4□□□□□ -1.06
PTPRK-220ENST00000531466 CLCQ05315 142 aa8.4□□□□□ -1.06
PTPRK-220ENST00000531466 GK5Q6ZS86 529 aa8.4□□□□□ -1.06
PTPRK-220ENST00000531466 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
PTPRK-220ENST00000531466 PCDHB12Q9Y5F1 795 aa8.4□□□□□ -1.06
PTPRK-220ENST00000531466 ZC3H12DA2A288 527 aaKnown RBP8.39□□□□□ -1.07
PTPRK-220ENST00000531466 VAV1P15498 845 aa8.39□□□□□ -1.07
PTPRK-220ENST00000531466 CCNFP41002 786 aa8.39□□□□□ -1.07
PTPRK-220ENST00000531466 LIMS1P48059 325 aa8.39□□□□□ -1.07
PTPRK-220ENST00000531466 PLEKHN1Q494U1 663 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-220ENST00000531466 SEZ6Q53EL9 994 aa8.39□□□□□ -1.07
PTPRK-220ENST00000531466 ZNF296Q8WUU4 475 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-220ENST00000531466 SLC6A18Q96N87 628 aa8.39□□□□□ -1.07
PTPRK-220ENST00000531466 ZNF200P98182 395 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-220ENST00000531466 CBX2Q14781 532 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-220ENST00000531466 TMEM52Q8NDY8 209 aa8.38□□□□□ -1.07
PTPRK-220ENST00000531466 UBP1Q9NZI7 540 aa8.38□□□□□ -1.07
PTPRK-220ENST00000531466 FFAR3O14843 346 aa8.37□□□□□ -1.07
PTPRK-220ENST00000531466 ADRB1P08588 477 aa8.37□□□□□ -1.07
PTPRK-220ENST00000531466 NME1P15531 152 aaKnown RBP8.37□□□□□ -1.07
PTPRK-220ENST00000531466 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
PTPRK-220ENST00000531466 AEBP1Q8IUX7 1158 aa8.37□□□□□ -1.07
PTPRK-220ENST00000531466 BDH2Q9BUT1 245 aa8.37□□□□□ -1.07
PTPRK-220ENST00000531466 MSL3P1P0C860 447 aa8.36□□□□□ -1.07
PTPRK-220ENST00000531466 IGFBP6P24592 240 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-220ENST00000531466 MCM4P33991 863 aa8.36□□□□□ -1.07
PTPRK-220ENST00000531466 AUHQ13825 339 aaKnown RBP8.36□□□□□ -1.07
PTPRK-220ENST00000531466 RTP2Q5QGT7 225 aa8.36□□□□□ -1.07
PTPRK-220ENST00000531466 ZC3H14Q6PJT7 736 aaKnown RBP8.36□□□□□ -1.07
PTPRK-220ENST00000531466 NAT16Q8N8M0 369 aa8.36□□□□□ -1.07
PTPRK-220ENST00000531466 DSCC1Q9BVC3 393 aa8.36□□□□□ -1.07
PTPRK-220ENST00000531466 A0A1W2PQ27 194 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 A0A1W2PQ64 194 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 A0A1W2PQC6 194 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 A0A1W2PQD8 194 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 FAM86C2PA6NEL3 165 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 MAPKAPK2P49137 400 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 MVKQ03426 396 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 PLP2Q04941 152 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 APOBRQ0VD83 1088 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 EAF1Q96JC9 268 aaPredicted RBP8.35□□□□□ -1.07
PTPRK-220ENST00000531466 SLC9A7Q96T83 725 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 ADAMTS1Q9UHI8 967 aa8.35□□□□□ -1.07
PTPRK-220ENST00000531466 IRS2Q9Y4H2 1338 aa8.34□□□□□ -1.07
PTPRK-220ENST00000531466 PRICKLE3O43900 615 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-220ENST00000531466 GSTM1P09488 218 aa8.34□□□□□ -1.07
PTPRK-220ENST00000531466 PFKLP17858 780 aa8.34□□□□□ -1.07
PTPRK-220ENST00000531466 KCNC1P48547 511 aa8.34□□□□□ -1.07
PTPRK-220ENST00000531466 SLURP1P55000 103 aa8.34□□□□□ -1.07
PTPRK-220ENST00000531466 REXO1Q8N1G1 1221 aaKnown RBP8.34□□□□□ -1.07
PTPRK-220ENST00000531466 HCFC2Q9Y5Z7 792 aa8.34□□□□□ -1.07
PTPRK-220ENST00000531466 TNFRSF10CO14798 259 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 GSNP06396 782 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 NR1I3Q14994 352 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 RTP5Q14D33 572 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 LSRQ86X29 649 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-220ENST00000531466 ADGRG2Q8IZP9 1017 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 SLC12A9Q9BXP2 914 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 GGT7Q9UJ14 662 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
PTPRK-220ENST00000531466 MEIS3P2A8K0S8 358 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 ITGAEP38570 1179 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 ZNF165P49910 485 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 EFEMP1Q12805 493 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 LRRFIP1Q32MZ4 808 aaKnown RBP8.32□□□□□ -1.08
PTPRK-220ENST00000531466 JAMLQ86YT9 394 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 C7orf61Q8IZ16 206 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 NLGN1Q8N2Q7 840 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 PRR13Q9NZ81 148 aa8.32□□□□□ -1.08
PTPRK-220ENST00000531466 A0A1B0GTL3 188 aa8.31□□□□□ -1.08
PTPRK-220ENST00000531466 C9IYK1 514 aa8.31□□□□□ -1.08
PTPRK-220ENST00000531466 SPATS1Q496A3 300 aa8.31□□□□□ -1.08
PTPRK-220ENST00000531466 CCDC144CPQ8IYA2 1237 aa8.31□□□□□ -1.08
PTPRK-220ENST00000531466 BORCS6Q96GS4 357 aa8.31□□□□□ -1.08
PTPRK-220ENST00000531466 SUCOQ9UBS9 1254 aaKnown RBP8.31□□□□□ -1.08
PTPRK-220ENST00000531466 SUSD2Q9UGT4 822 aa8.31□□□□□ -1.08
PTPRK-220ENST00000531466 H0Y8X5 98 aa8.3□□□□□ -1.08
PTPRK-220ENST00000531466 SHOXO15266 292 aa8.3□□□□□ -1.08
PTPRK-220ENST00000531466 DBHP09172 617 aa8.3□□□□□ -1.08
PTPRK-220ENST00000531466 TARBP2Q15633 366 aaKnown RBP8.3□□□□□ -1.08
PTPRK-220ENST00000531466 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
PTPRK-220ENST00000531466 HLA-DQA1Q5Y7H0 255 aa8.3□□□□□ -1.08
PTPRK-220ENST00000531466 CWF19L1Q69YN2 538 aaKnown RBP8.3□□□□□ -1.08
PTPRK-220ENST00000531466 BICRALQ6AI39 1079 aa8.3□□□□□ -1.08
PTPRK-220ENST00000531466 A0A1W2PQJ5 194 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
PTPRK-220ENST00000531466 CYBBP04839 570 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 FBLN1P23142 703 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 CAP1Q01518 475 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 PAQR3Q6TCH7 311 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 NKD1Q969G9 470 aa8.29□□□□□ -1.08
PTPRK-220ENST00000531466 ACRP10323 421 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 ATF2P15336 505 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 TACR1P25103 407 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 FOXO4P98177 505 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 ZXDCQ2QGD7 858 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms