RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 SEC23AQ15436 765 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 LHX8Q68G74 356 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 FAM109BQ6ICB4 259 aaPredicted RBP16.45■□□□□ 0.22
CTSB-217ENST00000530296 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
CTSB-217ENST00000530296 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
CTSB-217ENST00000530296 MTMR10Q9NXD2 777 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 ADAMTS5Q9UNA0 930 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 TAF6LQ9Y6J9 622 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 SLC15A5A6NIM6 579 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 VWA5AO00534 786 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 ZBED4O75132 1171 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 PDHBP11177 359 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 Q3C1V9 767 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 LBHD1Q9BQE6 289 aaPredicted RBP16.44■□□□□ 0.22
CTSB-217ENST00000530296 PORCNQ9H237 461 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 PRKAG2Q9UGJ0 569 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
CTSB-217ENST00000530296 HOXC6P09630 235 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 LIFRP42702 1097 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 OAZ1P54368 228 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
CTSB-217ENST00000530296 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 IGDCC4Q8TDY8 1250 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 ATG4CQ96DT6 458 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 FBXO28Q9NVF7 368 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
CTSB-217ENST00000530296 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 STRNO43815 780 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 SLC25A27O95847 323 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
CTSB-217ENST00000530296 CALM1P0DP23 149 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 CALM2P0DP24 149 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 CALM3P0DP25 149 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 CCND3P30281 292 aaPredicted RBP16.42■□□□□ 0.22
CTSB-217ENST00000530296 ANTXR2P58335 489 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 ANAPC15P60006 121 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 FGD1P98174 961 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 LRRC26Q2I0M4 334 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 BLOC1S2Q6QNY1 142 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 SHCBP1Q8NEM2 672 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 JAKMIP1Q96N16 626 aaKnown RBP16.42■□□□□ 0.22
CTSB-217ENST00000530296 CUL9Q8IWT3 2517 aa16.42■□□□□ 0.22
CTSB-217ENST00000530296 DNM1LO00429 736 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 ATP2A1O14983 1001 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 DDAH1O94760 285 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 PTPREP23469 700 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 KIF5BP33176 963 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 PLS1Q14651 629 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 CCL14Q16627 93 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 TEX13BQ9BXU2 312 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 SPATC1LQ9H0A9 340 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 MROH8Q9H579 483 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 SLC38A10Q9HBR0 1119 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 SLC5A4Q9NY91 659 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
CTSB-217ENST00000530296 DDX20Q9UHI6 824 aaKnown RBP16.41■□□□□ 0.22
CTSB-217ENST00000530296 DNAH12Q6ZR08 3092 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 A0A0G2JMZ2 1700 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 SH2B2O14492 632 aaPredicted RBP16.4■□□□□ 0.22
CTSB-217ENST00000530296 CNMDO75829 334 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 STAT3P40763 770 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 EXOSC10Q01780 885 aaKnown RBP16.4■□□□□ 0.22
CTSB-217ENST00000530296 GRB14Q14449 540 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 WDR78Q5VTH9 848 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 ARRDC4Q8NCT1 418 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 SENP6Q9GZR1 1112 aaPredicted RBP16.4■□□□□ 0.22
CTSB-217ENST00000530296 UPF2Q9HAU5 1272 aaKnown RBP16.4■□□□□ 0.22
CTSB-217ENST00000530296 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 SLC12A7Q9Y666 1083 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
CTSB-217ENST00000530296 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
CTSB-217ENST00000530296 RLFQ13129 1914 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
CTSB-217ENST00000530296 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 Q7L0L9 218 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 SGMS1Q86VZ5 419 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 RIOX2Q8IUF8 465 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 CTCFLQ8NI51 663 aaPredicted RBP16.39■□□□□ 0.21
CTSB-217ENST00000530296 MOV10L1Q9BXT6 1211 aaKnown RBP16.39■□□□□ 0.21
CTSB-217ENST00000530296 FBXO40Q9UH90 709 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 ZNF214Q9UL59 606 aaPredicted RBP16.39■□□□□ 0.21
CTSB-217ENST00000530296 PRR12Q9ULL5 1215 aa16.39■□□□□ 0.21
CTSB-217ENST00000530296 CYP46A1Q9Y6A2 500 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms