RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 TRIM49BA6NDI0 452 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 PRPHP41219 470 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 CCDC12Q8WUD4 166 aaPredicted RBP22.97■■□□□ 1.27
SMIM3-201ENST00000526627 ABHD10Q9NUJ1 306 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 FLT1P17948 1338 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 H7C1D1 291 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 NEDD1Q8NHV4 660 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 EYA3Q99504 573 aa22.97■■□□□ 1.27
SMIM3-201ENST00000526627 LAD1O00515 517 aa22.96■■□□□ 1.27
SMIM3-201ENST00000526627 BMS1Q14692 1282 aaKnown RBP22.96■■□□□ 1.27
SMIM3-201ENST00000526627 PLIN2Q99541 437 aa22.96■■□□□ 1.27
SMIM3-201ENST00000526627 TOM1O60784 492 aa22.96■■□□□ 1.27
SMIM3-201ENST00000526627 PARP1P09874 1014 aaKnown RBP22.96■■□□□ 1.27
SMIM3-201ENST00000526627 IL1R1P14778 569 aa22.96■■□□□ 1.27
SMIM3-201ENST00000526627 UBA7P41226 1012 aa22.96■■□□□ 1.27
SMIM3-201ENST00000526627 RHBDL3P58872 404 aa22.96■■□□□ 1.27
SMIM3-201ENST00000526627 MYH1P12882 1939 aa22.95■■□□□ 1.26
SMIM3-201ENST00000526627 UFL1O94874 794 aa22.95■■□□□ 1.26
SMIM3-201ENST00000526627 RHOBTB3O94955 611 aa22.95■■□□□ 1.26
SMIM3-201ENST00000526627 TPM1P09493 284 aa22.95■■□□□ 1.26
SMIM3-201ENST00000526627 PNMA6AP0CW24 399 aaPredicted RBP22.95■■□□□ 1.26
SMIM3-201ENST00000526627 TMTC1Q8IUR5 882 aa22.95■■□□□ 1.26
SMIM3-201ENST00000526627 ACRBPQ8NEB7 543 aa22.95■■□□□ 1.26
SMIM3-201ENST00000526627 CRY2Q49AN0 593 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 TEX11Q8IYF3 940 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 CERKQ8TCT0 537 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 MYL1P05976 194 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 NOVP48745 357 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 USP17L2Q6R6M4 530 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 GIMAP8Q8ND71 665 aaPredicted RBP22.94■■□□□ 1.26
SMIM3-201ENST00000526627 ANKRD20A12PQ8NF67 263 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 ZNF287Q9HBT7 754 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 ST7Q9NRC1 585 aa22.94■■□□□ 1.26
SMIM3-201ENST00000526627 ABL1P00519 1130 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 TRIM14Q14142 442 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 CERS3Q8IU89 383 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 ATP2B4P23634 1241 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 NAPAP54920 295 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 KRT25Q7Z3Z0 450 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 CREBRFQ8IUR6 639 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 GPR161Q8N6U8 529 aaKnown RBP22.93■■□□□ 1.26
SMIM3-201ENST00000526627 RASSF8Q8NHQ8 419 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 RPGRQ92834 1020 aaKnown RBP22.93■■□□□ 1.26
SMIM3-201ENST00000526627 FAM163AQ96GL9 167 aaPredicted RBP22.93■■□□□ 1.26
SMIM3-201ENST00000526627 NUP88Q99567 741 aaPredicted RBP22.93■■□□□ 1.26
SMIM3-201ENST00000526627 LRRC4BQ9NT99 713 aa22.93■■□□□ 1.26
SMIM3-201ENST00000526627 ARGLU1Q9NWB6 273 aaPredicted RBP22.93■■□□□ 1.26
SMIM3-201ENST00000526627 KIF5CO60282 957 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 OR52Z1P0C646 297 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 PLCG1P19174 1290 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 UBXN1Q04323 297 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 TXNRD1Q16881 649 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 TTI2Q6NXR4 508 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 TMCO3Q6UWJ1 677 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 ZNF507Q8TCN5 953 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 CEP95Q96GE4 821 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 TTF2Q9UNY4 1162 aaKnown RBP22.92■■□□□ 1.26
SMIM3-201ENST00000526627 SMCO2A6NFE2 343 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 LGALS16A8MUM7 142 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 KRT9P35527 623 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 ARHGAP25P42331 645 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 PLA2G4AP47712 749 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 TEX35Q5T0J7 233 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 THAP9Q9H5L6 903 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 USP21Q9UK80 565 aa22.92■■□□□ 1.26
SMIM3-201ENST00000526627 GAKO14976 1311 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 SEMA3FQ13275 785 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 NONOQ15233 471 aaKnown RBP eCLIP22.91■■□□□ 1.26
SMIM3-201ENST00000526627 ZNF569Q5MCW4 686 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 CYP26C1Q6V0L0 522 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 CABP7Q86V35 215 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 MB21D1Q8N884 522 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 RABGGTAQ92696 567 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 AK8Q96MA6 479 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 GGA1Q9UJY5 639 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 SEC31AO94979 1220 aaKnown RBP22.91■■□□□ 1.26
SMIM3-201ENST00000526627 LETM2Q2VYF4 491 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 CUEDC2Q9H467 287 aa22.91■■□□□ 1.26
SMIM3-201ENST00000526627 CCNT1O60563 726 aaKnown RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 SMARCA1P28370 1054 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 TERF2Q15554 542 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 CHP1Q99653 195 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 DUSP9Q99956 384 aaKnown RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 ZHX1Q9UKY1 873 aaPredicted RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 PLCG2P16885 1265 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 EEF1GP26641 437 aaKnown RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 MFSD14BQ5SR56 506 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 SLC35F6Q8N357 371 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 RRP36Q96EU6 259 aaKnown RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 PIGSQ96S52 555 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 MMTAG2Q9BU76 263 aaKnown RBP22.9■■□□□ 1.26
SMIM3-201ENST00000526627 MAGEF1Q9HAY2 307 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 C6orf50Q9HD87 102 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 POLLQ9UGP5 575 aa22.9■■□□□ 1.26
SMIM3-201ENST00000526627 A0A1W2PQC6 194 aa22.89■■□□□ 1.25
SMIM3-201ENST00000526627 TTC26A0AVF1 554 aa22.89■■□□□ 1.25
SMIM3-201ENST00000526627 NEK8Q86SG6 692 aa22.89■■□□□ 1.25
SMIM3-201ENST00000526627 GOLGA1Q92805 767 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms