RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 CERS3Q8IU89 383 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 SPACA3Q8IXA5 215 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 PLD6Q8N2A8 252 aaKnown RBP6.7□□□□□ -1.34
USP47-206ENST00000525367 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 DHRS4Q9BTZ2 278 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 DUSP15Q9H1R2 295 aaPredicted RBP6.7□□□□□ -1.34
USP47-206ENST00000525367 KLHL42Q9P2K6 505 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 KCNH3Q9ULD8 1083 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 PRKAB1Q9Y478 270 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 ST14Q9Y5Y6 855 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 FAM155AB1AL88 458 aaPredicted RBP6.69□□□□□ -1.34
USP47-206ENST00000525367 H3BS24 57 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 DNAJC6O75061 913 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 IGLV1-40P01703 118 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 FGFR1P11362 822 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 SRFP11831 508 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 IFNGR1P15260 489 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 GFRA1P56159 465 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 TCEA2Q15560 299 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 LONRF2Q1L5Z9 754 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 NSMFQ6X4W1 530 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 DHX37Q8IY37 1157 aaKnown RBP6.69□□□□□ -1.34
USP47-206ENST00000525367 TMEM145Q8NBT3 493 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 COX4I2Q96KJ9 171 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 SLC26A8Q96RN1 970 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 OSBPL1AQ9BXW6 950 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 NKX2-4Q9H2Z4 354 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 SPC25Q9HBM1 224 aa6.69□□□□□ -1.34
USP47-206ENST00000525367 NCOA5Q9HCD5 579 aaKnown RBP6.69□□□□□ -1.34
USP47-206ENST00000525367 A0A087WZG4 1122 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 IRS4O14654 1257 aaPredicted RBP6.68□□□□□ -1.34
USP47-206ENST00000525367 CEACAM5P06731 702 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 CD3EP07766 207 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 SNRPB2P08579 225 aaKnown RBP6.68□□□□□ -1.34
USP47-206ENST00000525367 C6orf222P0C671 652 aaPredicted RBP6.68□□□□□ -1.34
USP47-206ENST00000525367 ECI1P42126 302 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 KCNJ6P48051 423 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 PABPC4Q13310 644 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP47-206ENST00000525367 NTRK3Q16288 839 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 CLEC16AQ2KHT3 1053 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 TAF7LQ5H9L4 462 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 DUSP27Q5VZP5 1158 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 DENND5AQ6IQ26 1287 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 ARHGAP27Q6ZUM4 889 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 GPR62Q9BZJ7 368 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 IFT57Q9NWB7 429 aa6.68□□□□□ -1.34
USP47-206ENST00000525367 DIS3Q9Y2L1 958 aaKnown RBP6.68□□□□□ -1.34
USP47-206ENST00000525367 HOXA10P31260 410 aaPredicted RBP6.67□□□□□ -1.34
USP47-206ENST00000525367 AMPD2Q01433 879 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 CYP27A1Q02318 531 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 SCRN1Q12765 414 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 GRB10Q13322 594 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 HSP90AB2PQ58FF8 381 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 POMZP3Q6PJE2 187 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 PIWIL2Q8TC59 973 aaKnown RBP6.67□□□□□ -1.34
USP47-206ENST00000525367 C1orf159Q96HA4 380 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 PSMD1Q99460 953 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 ASCC2Q9H1I8 757 aaPredicted RBP6.67□□□□□ -1.34
USP47-206ENST00000525367 PCDH12Q9NPG4 1184 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 GPRC5CQ9NQ84 441 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 ATG3Q9NT62 314 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 ZSWIM5Q9P217 1185 aa6.67□□□□□ -1.34
USP47-206ENST00000525367 SF3B6Q9Y3B4 125 aaKnown RBP6.67□□□□□ -1.34
USP47-206ENST00000525367 PRR19A6NJB7 356 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 SDSP20132 328 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 ZDHHC13Q8IUH4 622 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 SCUBE1Q8IWY4 988 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 CRACR2BQ8N4Y2 399 aaPredicted RBP6.66□□□□□ -1.34
USP47-206ENST00000525367 SLC7A14Q8TBB6 771 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 FCRL3Q96P31 734 aaPredicted RBP6.66□□□□□ -1.34
USP47-206ENST00000525367 SLC12A9Q9BXP2 914 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 FAM126AQ9BYI3 521 aaPredicted RBP6.66□□□□□ -1.34
USP47-206ENST00000525367 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
USP47-206ENST00000525367 ZC3H7BQ9UGR2 993 aaKnown RBP6.66□□□□□ -1.34
USP47-206ENST00000525367 TMEFF2Q9UIK5 374 aaPredicted RBP6.66□□□□□ -1.34
USP47-206ENST00000525367 PLEKHD1A6NEE1 506 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 ARNTLO00327 626 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 FKTNO75072 461 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 GSNP06396 782 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 THBDP07204 575 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 TPP2P29144 1249 aaPredicted RBP6.65□□□□□ -1.34
USP47-206ENST00000525367 MASP1P48740 699 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 SUMO1P63165 101 aaKnown RBP6.65□□□□□ -1.34
USP47-206ENST00000525367 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 ZPBP2Q6X784 338 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
USP47-206ENST00000525367 NIM1KQ8IY84 436 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 DAGLBQ8NCG7 672 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 KREMEN2Q8NCW0 462 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 UBE2FQ969M7 185 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 FOXP3Q9BZS1 431 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 SLC52A2Q9HAB3 445 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 NDOR1Q9UHB4 597 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 TRAF6Q9Y4K3 522 aa6.65□□□□□ -1.34
USP47-206ENST00000525367 ASXL2Q76L83 1435 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms