RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 MYD88Q99836 296 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 KLHL11Q9NVR0 708 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 C9orf78Q9NZ63 289 aaPredicted RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 SAMD15Q9P1V8 674 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 SOX13Q9UN79 622 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 DYRK1BQ9Y463 629 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 IPPQ9Y573 584 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 TACC3Q9Y6A5 838 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 DLX3O60479 287 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 PPM1BO75688 479 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 CFBP00751 764 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 NEFMP07197 916 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 ASGR2P07307 311 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 SETSIPP0DME0 302 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 HSPA6P17066 643 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 ADCYAP1R1P41586 468 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 KCNJ6P48051 423 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 YARSP54577 528 aaKnown RBP6.68□□□□□ -1.34
USP47-204ENST00000525078 AK2P54819 239 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 GEMIN4P57678 1058 aaKnown RBP6.68□□□□□ -1.34
USP47-204ENST00000525078 CABP4P57796 275 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 ETF1P62495 437 aaKnown RBP6.68□□□□□ -1.34
USP47-204ENST00000525078 HNRNPUQ00839 825 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP47-204ENST00000525078 KLF1Q13351 362 aaPredicted RBP6.68□□□□□ -1.34
USP47-204ENST00000525078 CNGB1Q14028 1251 aaPredicted RBP6.68□□□□□ -1.34
USP47-204ENST00000525078 SIM2Q14190 667 aaPredicted RBP6.68□□□□□ -1.34
USP47-204ENST00000525078 TMEM240Q5SV17 173 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 ANKLE2Q86XL3 938 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 KIF18BQ86Y91 864 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 TMEM192Q8IY95 271 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 CCDC144CPQ8IYA2 1237 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 FAM13CQ8NE31 585 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 AIFM3Q96NN9 605 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 SLC30A3Q99726 388 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 LACRTQ9GZZ8 138 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 MKS1Q9NXB0 559 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 GTF2IRD1Q9UHL9 959 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 ADAM30Q9UKF2 790 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 ZKSCAN5Q9Y2L8 839 aa6.68□□□□□ -1.34
USP47-204ENST00000525078 KLRG2A4D1S0 409 aaPredicted RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 SPDYE3A6NKU9 549 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 FIGNL2A6NMB9 653 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 DCDC2CA8MYV0 355 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 ZBTB42B2RXF5 422 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 PRRT4C9JH25 899 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 ULK1O75385 1050 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 CRTAMO95727 393 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 MAPTP10636 758 aaKnown RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 GBP1P32455 592 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 GRIK1P39086 918 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 GSTM4Q03013 218 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 TNP2Q05952 138 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 PUM3Q15397 648 aaKnown RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 PCSK7Q16549 785 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 LONRF1Q17RB8 773 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 XRRA1Q6P2D8 792 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 POMZP3Q6PJE2 187 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 CRACR2BQ8N4Y2 399 aaPredicted RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 CCDC89Q8N998 374 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 PPHLN1Q8NEY8 458 aaKnown RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 KCTD13Q8WZ19 329 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 SMARCC1Q92922 1105 aaPredicted RBP6.67□□□□□ -1.34
USP47-204ENST00000525078 FAXDC2Q96IV6 333 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 CORO1BQ9BR76 489 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 KLHL25Q9H0H3 589 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 NMRK2Q9NPI5 230 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 DDX21Q9NR30 783 aaKnown RBP eCLIP6.67□□□□□ -1.34
USP47-204ENST00000525078 PICK1Q9NRD5 415 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 C1orf112Q9NSG2 853 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 AKT3Q9Y243 479 aa6.67□□□□□ -1.34
USP47-204ENST00000525078 TTLL8A6PVC2 850 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 C9IYK1 514 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 K7ESF4 209 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 XPOTO43592 962 aaKnown RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 CTNND1O60716 968 aaKnown RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 CLEC3AO75596 197 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 TYRP1P17643 537 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 RENBPP51606 427 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 ERVK-21P61565 698 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 LBRQ14739 615 aaKnown RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 IFIT1BQ5T764 474 aaKnown RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 CATIPQ7Z7H3 387 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 MYLK4Q86YV6 388 aaPredicted RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 DRC7Q8IY82 874 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 C1orf162Q8NEQ5 155 aaPredicted RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 BTN2A2Q8WVV5 523 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 KIFC2Q96AC6 838 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 MPP4Q96JB8 637 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 VTA1Q9NP79 307 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 SH2B1Q9NRF2 756 aaPredicted RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 FBXO2Q9UK22 296 aaPredicted RBP6.66□□□□□ -1.34
USP47-204ENST00000525078 TRAF6Q9Y4K3 522 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 PCDHA9Q9Y5H5 950 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 CSADQ9Y600 493 aa6.66□□□□□ -1.34
USP47-204ENST00000525078 A0A087WZG4 1122 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 ABHD14A-ACY1A0A1B0GW23 586 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms