RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 PLA2G6O60733 806 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 NDUFB10O96000 172 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 FOSP01100 380 aaPredicted RBP11.34□□□□□ -0.59
VPS13B-212ENST00000524330 GCFC2P16383 781 aaKnown RBP11.34□□□□□ -0.59
VPS13B-212ENST00000524330 MCM7P33993 719 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 STAT2P52630 851 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 USP14P54578 494 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 PTGDRQ13258 359 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 AP3B2Q13367 1082 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 NPY5RQ15761 445 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
VPS13B-212ENST00000524330 TMEM266Q2M3C6 531 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 SUPT20HL1Q3ZLR7 823 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 KRBA2Q6ZNG9 492 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 FBXO11Q86XK2 927 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 IQUBQ8NA54 791 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 RNF214Q8ND24 703 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 AK8Q96MA6 479 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 TMEM39BQ9GZU3 492 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 PSTPIP2Q9H939 334 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 FEM1BQ9UK73 627 aa11.34□□□□□ -0.59
VPS13B-212ENST00000524330 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
VPS13B-212ENST00000524330 SMTNL1A8MU46 457 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 M0R2N6 131 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 MARCH6O60337 910 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 ZNF165P49910 485 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 INF2Q27J81 1249 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 TBC1D10BQ4KMP7 808 aaPredicted RBP11.33□□□□□ -0.6
VPS13B-212ENST00000524330 ANO6Q4KMQ2 910 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 RASSF8Q8NHQ8 419 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 LPAR1Q92633 364 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
VPS13B-212ENST00000524330 CLIC6Q96NY7 704 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
VPS13B-212ENST00000524330 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 VCPKMTQ9H867 229 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 GPRC5DQ9NZD1 345 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 PCDHA1Q9Y5I3 950 aa11.33□□□□□ -0.6
VPS13B-212ENST00000524330 VWA3AA6NCI4 1184 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 GOLGA6L6A8MZA4 724 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 NEMFO60524 1076 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 FDX1P10109 184 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 SLC16A2P36021 539 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 UBA7P41226 1012 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 NLRP12P59046 1061 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 LETM2Q2VYF4 491 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 TTBK2Q6IQ55 1244 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 TRIML1Q8N9V2 468 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 COA7Q96BR5 231 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 FHDC1Q9C0D6 1143 aaPredicted RBP11.32□□□□□ -0.6
VPS13B-212ENST00000524330 DEFB129Q9H1M3 183 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 CPVLQ9H3G5 476 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 MRVI1Q9Y6F6 885 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 PITPNM2Q9BZ72 1349 aa11.32□□□□□ -0.6
VPS13B-212ENST00000524330 BAZ2BQ9UIF8 2168 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 SLC26A4O43511 780 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 CCNT1O60563 726 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 PTMAP06454 111 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 TPM3P06753 285 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 SEMA3FQ13275 785 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 SLC35G1Q2M3R5 365 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 HS1BP3Q53T59 392 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 TBCKQ8TEA7 893 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 SMARCE1Q969G3 411 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 SHISA4Q96DD7 197 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 BPIFA3Q9BQP9 254 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
VPS13B-212ENST00000524330 BIN2Q9UBW5 565 aaPredicted RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
VPS13B-212ENST00000524330 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 SPDYE3A6NKU9 549 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 MYL1P05976 194 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 USP11P51784 963 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 POSTNQ15063 836 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 EARS2Q5JPH6 523 aaKnown RBP11.3□□□□□ -0.6
VPS13B-212ENST00000524330 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms