RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 GUCD1Q96NT3 240 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 RNF146Q9NTX7 359 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 PNMA2Q9UL42 364 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 PHF24Q9UPV7 400 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 FRMPD3Q5JV73 1810 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 DNAJC25-GNG10A0A024R161 153 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 ASB14A6NK59 587 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 FOXP2O15409 715 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 PGK1P00558 417 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 ZNF865P0CJ78 1059 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 TOP1P11387 765 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 SMAD3P84022 425 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 NUCB1Q02818 461 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 TRIM60Q495X7 471 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 ZNF697Q5TEC3 545 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 RCSD1Q6JBY9 416 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 CCDC174Q6PII3 467 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 SLC39A5Q6ZMH5 540 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 MFSD6Q6ZSS7 791 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 KCTD1Q719H9 257 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 NUP133Q8WUM0 1156 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 FERMT2Q96AC1 680 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 TSEN34Q9BSV6 310 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 COL25A1Q9BXS0 654 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 ABHD16BQ9H3Z7 469 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 MTMR7Q9Y216 660 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 RIPK3Q9Y572 518 aa10.45□□□□□ -0.74
CTNNA1-240ENST00000523912 NMT2O60551 498 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 DUSP11O75319 330 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 FGAP02671 866 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 FGRP09769 529 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 ALAS1P13196 640 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 TAL1P17542 331 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 SDSP20132 328 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 ACVR2BQ13705 512 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 CCDC178Q5BJE1 867 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 ARMCX2Q7L311 632 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 PCSK9Q8NBP7 692 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 ESR2Q92731 530 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 CHMP4CQ96CF2 233 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 TRERF1Q96PN7 1200 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 OSBPL3Q9H4L5 887 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 STARD7Q9NQZ5 370 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 IL17RBQ9NRM6 502 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 TCP11L1Q9NUJ3 509 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 CCPG1Q9ULG6 757 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 PRR12Q9ULL5 1215 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
CTNNA1-240ENST00000523912 SYNRGQ9UMZ2 1314 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 A0A1W2PQ45 241 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 A0A1W2PQY0 241 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 PQBP1O60828 265 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 ICAM1P05362 532 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 CLTBP09497 229 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 HAND2P61296 217 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 SYDE2Q5VT97 1194 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 NOL8Q76FK4 1167 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 AGBL1Q96MI9 1066 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 GLT1D1Q96MS3 346 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 MPHOSPH6Q99547 160 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 A1CFQ9NQ94 594 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 CTNNA3Q9UI47 895 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
CTNNA1-240ENST00000523912 ZNF536O15090 1300 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 MROH7Q68CQ1 1323 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 DCDC2CA8MYV0 355 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 ZNF213O14771 459 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 ZEB2O60315 1214 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 ADAMTS4O75173 837 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 SNAI1O95863 264 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 C6orf222P0C671 652 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 CST5P28325 142 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 NOVP48745 357 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 ACLYP53396 1101 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 TLE2Q04725 743 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 CWC27Q6UX04 472 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 NSMFQ6X4W1 530 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 IQCA1Q86XH1 822 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 CCDC144CPQ8IYA2 1237 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 FAM133AQ8N9E0 248 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 TTC14Q96N46 770 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 TMEM47Q9BQJ4 181 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 RANBP17Q9H2T7 1088 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 SEMA6BQ9H3T3 888 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 PDLIM7Q9NR12 457 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 ADD3Q9UEY8 706 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 TACC3Q9Y6A5 838 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 COL11A1P12107 1806 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
CTNNA1-240ENST00000523912 ELP1O95163 1332 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms