RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 BARHL2Q9NY43 387 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 FAM53CQ9NYF3 392 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 PALM3A6NDB9 673 aaPredicted RBP18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 EFCAB8A8MWE9 144 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 SEC31AO94979 1220 aaKnown RBP18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 CDK8P49336 464 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 GNAQP50148 359 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 PPP4CP60510 307 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 TEX35Q5T0J7 233 aa18.38■□□□□ 0.53
SMG1P3-206ENST00000522841 UBA7P41226 1012 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 ERVK-24P63145 666 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 IRF2BP1Q8IU81 584 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 FHOD1Q9Y613 1164 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 NHSQ6T4R5 1651 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 LRRC10BA6NIK2 292 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 LDHCP07864 332 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 ROBO3Q96MS0 1386 aa18.37■□□□□ 0.53
SMG1P3-206ENST00000522841 NAPAP54920 295 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 EP400Q96L91 3159 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 UBXN1Q04323 297 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 LETM2Q2VYF4 491 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 MFSD14BQ5SR56 506 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 CNGA4Q8IV77 575 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 FNBP4Q8N3X1 1017 aaPredicted RBP18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 NAA15Q9BXJ9 866 aaKnown RBP18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 RMND1Q9NWS8 449 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 TULP2O00295 520 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 PES1O00541 588 aaKnown RBP18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 TFRCP02786 760 aaKnown RBP18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 ZNF569Q5MCW4 686 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 ADSSL1Q8N142 457 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 CCDC148Q8NFR7 591 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 UBA5Q9GZZ9 404 aa18.36■□□□□ 0.53
SMG1P3-206ENST00000522841 SNED1Q8TER0 1413 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 KLRC4O43908 158 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 PARP1P09874 1014 aaKnown RBP18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 GGA1Q9UJY5 639 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 FLT1P17948 1338 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 BMS1Q14692 1282 aaKnown RBP18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 CEP95Q96GE4 821 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 ABHD10Q9NUJ1 306 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 CALCOCO1Q9P1Z2 691 aa18.35■□□□□ 0.53
SMG1P3-206ENST00000522841 ITIH6Q6UXX5 1313 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 SMCO2A6NFE2 343 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 CCNT1O60563 726 aaKnown RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 PNMA6AP0CW24 399 aaPredicted RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 KRT9P35527 623 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 HNRNPH2P55795 449 aaKnown RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 PICALMQ13492 652 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 TMCO3Q6UWJ1 677 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 CHP1Q99653 195 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 POLLQ9UGP5 575 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 DDX60LQ5H9U9 1706 aaKnown RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 C6orf229H3BNL8 230 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 SERPINB2P05120 415 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 TPM1P09493 284 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 EIF6P56537 245 aaKnown RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 CLEC10AQ8IUN9 316 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 DAGLBQ8NCG7 672 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 ANKRD20A12PQ8NF67 263 aa18.34■□□□□ 0.53
SMG1P3-206ENST00000522841 RIMBP2O15034 1052 aa18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 SPAG1Q07617 926 aa18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 TXNRD1Q16881 649 aa18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 PIGSQ96S52 555 aa18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 SLF1Q9BQI6 1058 aa18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 PUF60Q9UHX1 559 aaKnown RBP18.33■□□□□ 0.53
SMG1P3-206ENST00000522841 KIF5CO60282 957 aa18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 ZRANB2O95218 330 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 PLCG1P19174 1290 aa18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 JAKMIP3Q5VZ66 844 aa18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 C16orf86Q6ZW13 317 aa18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 RSRC2Q7L4I2 434 aaKnown RBP18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 KBTBD4Q9NVX7 518 aa18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
SMG1P3-206ENST00000522841 LY75O60449 1722 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 USP17L5A8MUK1 530 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 H7C1D1 291 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 GYS1P13807 737 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 SLC35F6Q8N357 371 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 ZMYND12Q9H0C1 365 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 ARGLU1Q9NWB6 273 aaPredicted RBP18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 TMEM260Q9NX78 707 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 MYH1P12882 1939 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 TECP42680 631 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 PLA2G4AP47712 749 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 RHBDL3P58872 404 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 CABP7Q86V35 215 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 TRIM47Q96LD4 638 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 CCSER1Q9C0I3 900 aa18.32■□□□□ 0.52
SMG1P3-206ENST00000522841 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms