RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PICK1Q9NRD5 415 aa7.78□□□□□ -1.16
PABPC1-220ENST00000522658 SRRDQ9UH36 339 aa7.78□□□□□ -1.16
PABPC1-220ENST00000522658 CPA4Q9UI42 421 aa7.78□□□□□ -1.16
PABPC1-220ENST00000522658 KIAA1024Q9UPX6 916 aa7.78□□□□□ -1.16
PABPC1-220ENST00000522658 RIPOR2Q9Y4F9 1068 aa7.78□□□□□ -1.16
PABPC1-220ENST00000522658 RPAP1Q9BWH6 1393 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-220ENST00000522658 PDHXO00330 501 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 FARP2O94887 1054 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-220ENST00000522658 EXOSC9Q06265 439 aaKnown RBP7.77□□□□□ -1.17
PABPC1-220ENST00000522658 SFSWAPQ12872 951 aaKnown RBP7.77□□□□□ -1.17
PABPC1-220ENST00000522658 DOC2BQ14184 412 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 BEND3Q5T5X7 828 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 ANKRD23Q86SG2 305 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 SMCR8Q8TEV9 937 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-220ENST00000522658 ZKSCAN4Q969J2 545 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-220ENST00000522658 ARHGAP39Q9C0H5 1083 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 SUGT1Q9Y2Z0 365 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 SNCAIPQ9Y6H5 919 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 AOX1Q06278 1338 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 IRS2Q9Y4H2 1338 aa7.77□□□□□ -1.17
PABPC1-220ENST00000522658 HTTP42858 3142 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 CCL5P13501 91 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 ALAS2P22557 587 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 PUM3Q15397 648 aaKnown RBP7.76□□□□□ -1.17
PABPC1-220ENST00000522658 FKBP1CQ5VVH2 108 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 GADL1Q6ZQY3 521 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 MIGA2Q7L4E1 593 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 PLEKHM2Q8IWE5 1019 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 WDR63Q8IWG1 891 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 ZSCAN29Q8IWY8 852 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-220ENST00000522658 WDR66Q8TBY9 1149 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 FAM84BQ96KN1 310 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-220ENST00000522658 ZDHHC15Q96MV8 337 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 TEPSINQ96N21 525 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 PRDM6Q9NQX0 595 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 GNL3LQ9NVN8 582 aaKnown RBP7.76□□□□□ -1.17
PABPC1-220ENST00000522658 STARD13Q9Y3M8 1113 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 CACNA1FO60840 1977 aa7.76□□□□□ -1.17
PABPC1-220ENST00000522658 MKI67P46013 3256 aaKnown RBP7.76□□□□□ -1.17
PABPC1-220ENST00000522658 CENPFP49454 3210 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 TNPO2O14787 897 aaKnown RBP7.75□□□□□ -1.17
PABPC1-220ENST00000522658 TFRCP02786 760 aaKnown RBP7.75□□□□□ -1.17
PABPC1-220ENST00000522658 GATA4P43694 442 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 GJA8P48165 433 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 CLDN10P78369 228 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 TCP10Q12799 353 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 FASTKD5Q7L8L6 764 aaKnown RBP7.75□□□□□ -1.17
PABPC1-220ENST00000522658 SLC17A8Q8NDX2 589 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 SUCLG2Q96I99 432 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 UCN2Q96RP3 112 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 BICC1Q9H694 974 aaKnown RBP7.75□□□□□ -1.17
PABPC1-220ENST00000522658 ZNF232Q9UNY5 417 aa7.75□□□□□ -1.17
PABPC1-220ENST00000522658 LRRFIP2Q9Y608 721 aaKnown RBP7.75□□□□□ -1.17
PABPC1-220ENST00000522658 KIAA0100Q14667 2235 aaKnown RBP7.75□□□□□ -1.17
PABPC1-220ENST00000522658 ANP32CO43423 234 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 VAMP4O75379 141 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 LDHBP07195 334 aaKnown RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 GJB1P08034 283 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 CAPN2P17655 700 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 INPP5BP32019 993 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 PSMA6P60900 246 aaKnown RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 PRKCZQ05513 592 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 EPHA10Q5JZY3 1008 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 HHIPL2Q6UWX4 724 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 C17orf99Q6UX52 265 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 FBXO33Q7Z6M2 555 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 TRIM50Q86XT4 487 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 DZIP1Q86YF9 867 aaKnown RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 ZGPATQ8N5A5 531 aaKnown RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 TPCN2Q8NHX9 752 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 U2AF1L4Q8WU68 220 aaKnown RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 FAM151AQ8WW52 585 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 COA7Q96BR5 231 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 PUS3Q9BZE2 481 aaKnown RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 TSPAN10Q9H1Z9 355 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-220ENST00000522658 KIF16BQ96L93 1317 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 AK9Q5TCS8 1911 aa7.74□□□□□ -1.17
PABPC1-220ENST00000522658 A0A1W2PPC1 479 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 M0R082 166 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 M0R2N6 131 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 ADCY3O60266 1144 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 DKK1O94907 266 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 PDE8BO95263 885 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 CAP1Q01518 475 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 LRRC24Q50LG9 513 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 MICALL1Q8N3F8 863 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 ZNF417Q8TAU3 575 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 RHPN1Q8TCX5 695 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 LPIN2Q92539 896 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 ZNF587Q96SQ5 575 aaPredicted RBP7.73□□□□□ -1.17
PABPC1-220ENST00000522658 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 CWC22Q9HCG8 908 aaKnown RBP7.73□□□□□ -1.17
PABPC1-220ENST00000522658 MYH13Q9UKX3 1938 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 BRCA2P51587 3418 aa7.73□□□□□ -1.17
PABPC1-220ENST00000522658 ZSWIM8A7E2V4 1837 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms