RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 A0A1W2PQD8 194 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 ZNF205O95201 554 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 VAV1P15498 845 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 REXO1Q8N1G1 1221 aaKnown RBP7.44□□□□□ -1.22
CLK4-207ENST00000520909 SYT8Q8NBV8 401 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 TEPSINQ96N21 525 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 ZC3H12DA2A288 527 aaKnown RBP7.43□□□□□ -1.22
CLK4-207ENST00000520909 NME1P15531 152 aaKnown RBP7.43□□□□□ -1.22
CLK4-207ENST00000520909 MCM4P33991 863 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 CRKP46108 304 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 NCKAP1LP55160 1127 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 CLCQ05315 142 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 AUHQ13825 339 aaKnown RBP7.43□□□□□ -1.22
CLK4-207ENST00000520909 NR1I3Q14994 352 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 SEZ6Q53EL9 994 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 TMEM192Q8IY95 271 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 NLGN1Q8N2Q7 840 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 EAF1Q96JC9 268 aaPredicted RBP7.43□□□□□ -1.22
CLK4-207ENST00000520909 TNFRSF12AQ9NP84 129 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
CLK4-207ENST00000520909 CTSKP43235 329 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 ZNF165P49910 485 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 FRMD5Q7Z6J6 570 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 SLC6A18Q96N87 628 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 JMJD8Q96S16 334 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 IMPACTQ9P2X3 320 aa7.42□□□□□ -1.22
CLK4-207ENST00000520909 GSNP06396 782 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 PFKLP17858 780 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 MAPKAPK2P49137 400 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 APOBRQ0VD83 1088 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 ZC3H14Q6PJT7 736 aaKnown RBP7.41□□□□□ -1.22
CLK4-207ENST00000520909 NAT16Q8N8M0 369 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 TMEM52Q8NDY8 209 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 BORCS6Q96GS4 357 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 DHRS1Q96LJ7 313 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 ADAM7Q9H2U9 754 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 UBP1Q9NZI7 540 aa7.41□□□□□ -1.22
CLK4-207ENST00000520909 TNFRSF10CO14798 259 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 ERCC3P19447 782 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 CRTC3Q6UUV7 619 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 TP53I13Q8NBR0 393 aaPredicted RBP7.4□□□□□ -1.22
CLK4-207ENST00000520909 DSCC1Q9BVC3 393 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 ANTXR1Q9H6X2 564 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 GGT7Q9UJ14 662 aa7.4□□□□□ -1.22
CLK4-207ENST00000520909 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.23
CLK4-207ENST00000520909 ADRB1P08588 477 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 KCNC1P48547 511 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 CEBPAP49715 358 aaPredicted RBP7.39□□□□□ -1.23
CLK4-207ENST00000520909 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 CAP1Q01518 475 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 MVKQ03426 396 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 PLP2Q04941 152 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 TARBP2Q15633 366 aaKnown RBP7.39□□□□□ -1.23
CLK4-207ENST00000520909 GGNQ86UU5 652 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 JAMLQ86YT9 394 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 NKD1Q969G9 470 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 ADAMTS1Q9UHI8 967 aa7.39□□□□□ -1.23
CLK4-207ENST00000520909 A0A1W2PQJ5 194 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 GSTM1P09488 218 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 NFKB2Q00653 900 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 PLEKHN1Q494U1 663 aaPredicted RBP7.38□□□□□ -1.23
CLK4-207ENST00000520909 RTP2Q5QGT7 225 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 CWF19L1Q69YN2 538 aaKnown RBP7.38□□□□□ -1.23
CLK4-207ENST00000520909 HS2ST1Q7LGA3 356 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 C7orf61Q8IZ16 206 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 SLC9A7Q96T83 725 aa7.38□□□□□ -1.23
CLK4-207ENST00000520909 MEIS3P2A8K0S8 358 aa7.37□□□□□ -1.23
CLK4-207ENST00000520909 FFAR3O14843 346 aa7.37□□□□□ -1.23
CLK4-207ENST00000520909 IGFBP6P24592 240 aaPredicted RBP7.37□□□□□ -1.23
CLK4-207ENST00000520909 ZNF200P98182 395 aaPredicted RBP7.37□□□□□ -1.23
CLK4-207ENST00000520909 INTS3Q68E01 1043 aaKnown RBP7.37□□□□□ -1.23
CLK4-207ENST00000520909 CCDC144CPQ8IYA2 1237 aa7.37□□□□□ -1.23
CLK4-207ENST00000520909 SUCOQ9UBS9 1254 aaKnown RBP7.37□□□□□ -1.23
CLK4-207ENST00000520909 LIMS1P48059 325 aa7.36□□□□□ -1.23
CLK4-207ENST00000520909 SPATS1Q496A3 300 aa7.36□□□□□ -1.23
CLK4-207ENST00000520909 PAQR3Q6TCH7 311 aa7.36□□□□□ -1.23
CLK4-207ENST00000520909 SLITRK4Q8IW52 837 aa7.36□□□□□ -1.23
CLK4-207ENST00000520909 SLC12A9Q9BXP2 914 aa7.36□□□□□ -1.23
CLK4-207ENST00000520909 CYBBP04839 570 aa7.35□□□□□ -1.23
CLK4-207ENST00000520909 MSL3P1P0C860 447 aa7.35□□□□□ -1.23
CLK4-207ENST00000520909 NOP2P46087 812 aaKnown RBP7.35□□□□□ -1.23
CLK4-207ENST00000520909 SLURP1P55000 103 aa7.35□□□□□ -1.23
CLK4-207ENST00000520909 NOL9Q5SY16 702 aaKnown RBP7.35□□□□□ -1.23
CLK4-207ENST00000520909 BDH2Q9BUT1 245 aa7.35□□□□□ -1.23
CLK4-207ENST00000520909 NT5C1AQ9BXI3 368 aa7.35□□□□□ -1.23
CLK4-207ENST00000520909 BICRALQ6AI39 1079 aa7.34□□□□□ -1.23
CLK4-207ENST00000520909 PDLIM7Q9NR12 457 aa7.34□□□□□ -1.23
CLK4-207ENST00000520909 SUSD2Q9UGT4 822 aa7.34□□□□□ -1.23
CLK4-207ENST00000520909 FAM86C2PA6NEL3 165 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 C9IYK1 514 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 DBHP09172 617 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 FOXO4P98177 505 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 ZXDCQ2QGD7 858 aaPredicted RBP7.33□□□□□ -1.24
CLK4-207ENST00000520909 ANKRD39Q53RE8 183 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 ZFYVE27Q5T4F4 411 aa7.33□□□□□ -1.24
CLK4-207ENST00000520909 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms