RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 QRICH1Q2TAL8 776 aa20.6■□□□□ 0.89
SDC2-205ENST00000520233 HOMER1Q86YM7 354 aa20.6■□□□□ 0.89
SDC2-205ENST00000520233 REPS2Q8NFH8 660 aa20.6■□□□□ 0.89
SDC2-205ENST00000520233 SMCR8Q8TEV9 937 aaPredicted RBP20.6■□□□□ 0.89
SDC2-205ENST00000520233 ATP2A1O14983 1001 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 DEXIO95424 95 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 GCLCP48506 637 aaPredicted RBP20.59■□□□□ 0.89
SDC2-205ENST00000520233 OAZ1P54368 228 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 SNAP25P60880 206 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 PKN1Q16512 942 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 POTEEQ6S8J3 1075 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 PIBF1Q8WXW3 757 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
SDC2-205ENST00000520233 PNMA2Q9UL42 364 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 RABGAP1Q9Y3P9 1069 aa20.59■□□□□ 0.89
SDC2-205ENST00000520233 ZNF536O15090 1300 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 hCG_1642624A0A1W2PR95 340 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 DTNBO60941 627 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 ICAM1P05362 532 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
SDC2-205ENST00000520233 FDPSP14324 419 aaKnown RBP20.58■□□□□ 0.89
SDC2-205ENST00000520233 PFKFB3Q16875 520 aaPredicted RBP20.58■□□□□ 0.89
SDC2-205ENST00000520233 WASF1Q92558 559 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 DDX11Q96FC9 970 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 AMNQ9BXJ7 453 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 ZFYVE28Q9HCC9 887 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 RBPJLQ9UBG7 517 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 SMC3Q9UQE7 1217 aa20.58■□□□□ 0.89
SDC2-205ENST00000520233 ADGRA2Q96PE1 1338 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 A0A0G2JMZ2 1700 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 hCG_1984214I3L0E3 225 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 CA12O43570 354 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 CNMDO75829 334 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 SCG2P13521 617 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 TRAF1Q13077 416 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 TMEM132BQ14DG7 1078 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 CCDC174Q6PII3 467 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 FBXO11Q86XK2 927 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 ZNF713Q8N859 430 aaPredicted RBP20.57■□□□□ 0.88
SDC2-205ENST00000520233 RAVER2Q9HCJ3 691 aaKnown RBP20.57■□□□□ 0.88
SDC2-205ENST00000520233 BTBD7Q9P203 1132 aa20.57■□□□□ 0.88
SDC2-205ENST00000520233 ZNF214Q9UL59 606 aaPredicted RBP20.57■□□□□ 0.88
SDC2-205ENST00000520233 TLR2O60603 784 aa20.56■□□□□ 0.88
SDC2-205ENST00000520233 PPP1R11O60927 126 aaPredicted RBP20.56■□□□□ 0.88
SDC2-205ENST00000520233 GJB2P29033 226 aa20.56■□□□□ 0.88
SDC2-205ENST00000520233 CPXCR1Q8N123 301 aa20.56■□□□□ 0.88
SDC2-205ENST00000520233 PAGR1Q9BTK6 254 aa20.56■□□□□ 0.88
SDC2-205ENST00000520233 CRHR2Q13324 411 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 DNAJC5GQ8N7S2 189 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 AGBL1Q96MI9 1066 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 CFHR5Q9BXR6 569 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 TEX13BQ9BXU2 312 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 TXNRD2Q9NNW7 524 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 MORF4L1Q9UBU8 362 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 CCPG1Q9ULG6 757 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 KIF3AQ9Y496 699 aa20.55■□□□□ 0.88
SDC2-205ENST00000520233 STAT3P40763 770 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 PLS1Q14651 629 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 WWC2Q6AWC2 1192 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 SNRNP48Q6IEG0 339 aaKnown RBP20.54■□□□□ 0.88
SDC2-205ENST00000520233 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 ANKRD13CQ8N6S4 541 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 GPKOWQ92917 476 aaPredicted RBP eCLIP20.54■□□□□ 0.88
SDC2-205ENST00000520233 ALG1Q9BT22 464 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 SPATC1LQ9H0A9 340 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 RNF186Q9NXI6 227 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 BARHL2Q9NY43 387 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 PCDHA1Q9Y5I3 950 aa20.54■□□□□ 0.88
SDC2-205ENST00000520233 PEX10O60683 326 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 SLC4A3P48751 1232 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 ERVK-9P63128 1117 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 ERVK-24P63145 666 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 MAP2K1Q02750 393 aaPredicted RBP20.53■□□□□ 0.88
SDC2-205ENST00000520233 FAM110CQ1W6H9 321 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 TKFCQ3LXA3 575 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 USH1GQ495M9 461 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 C17orf99Q6UX52 265 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 RIOX2Q8IUF8 465 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 FAM177A1Q8N128 213 aaPredicted RBP20.53■□□□□ 0.88
SDC2-205ENST00000520233 SPRYD3Q8NCJ5 442 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 COA7Q96BR5 231 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 AIFM3Q96NN9 605 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 SH3GLB2Q9NR46 395 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 DAXXQ9UER7 740 aaPredicted RBP20.53■□□□□ 0.88
SDC2-205ENST00000520233 ABCB11O95342 1321 aa20.53■□□□□ 0.88
SDC2-205ENST00000520233 STXBP3O00186 592 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 BCRP11274 1271 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 XBP1P17861 261 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 COPB2P35606 906 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 Q3C1V9 767 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 PPP1R18Q6NYC8 613 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 MOV10L1Q9BXT6 1211 aaKnown RBP20.52■□□□□ 0.88
SDC2-205ENST00000520233 CPA4Q9UI42 421 aa20.52■□□□□ 0.88
SDC2-205ENST00000520233 MRPL11Q9Y3B7 192 aaKnown RBP20.52■□□□□ 0.88
SDC2-205ENST00000520233 COL11A1P12107 1806 aaPredicted RBP20.51■□□□□ 0.87
SDC2-205ENST00000520233 BAZ2BQ9UIF8 2168 aaKnown RBP20.51■□□□□ 0.87
SDC2-205ENST00000520233 SLC25A27O95847 323 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms