RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 FZD9O00144 591 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
CCDC6-203ENST00000518638 BMP3P12645 472 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 GRM1Q13255 1194 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 TXNDC11Q6PKC3 985 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 USP50Q70EL3 339 aaPredicted RBP8.25□□□□□ -1.09
CCDC6-203ENST00000518638 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 TEX13AQ9BXU3 409 aaPredicted RBP8.25□□□□□ -1.09
CCDC6-203ENST00000518638 ZNF541Q9H0D2 1346 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 NPR1P16066 1061 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 JUNBP17275 347 aaPredicted RBP8.24□□□□□ -1.09
CCDC6-203ENST00000518638 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
CCDC6-203ENST00000518638 EIF5P55010 431 aaKnown RBP8.24□□□□□ -1.09
CCDC6-203ENST00000518638 EIF6P56537 245 aaKnown RBP8.24□□□□□ -1.09
CCDC6-203ENST00000518638 TBC1D9BQ66K14 1250 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 CYP4F22Q6NT55 531 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 CCNJLQ8IV13 435 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 TTC5Q8N0Z6 440 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 KLHL23Q8NBE8 558 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 TCF12Q99081 682 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 KRTAP4-11Q9BYQ6 195 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 CASP8AP2Q9UKL3 1982 aa8.24□□□□□ -1.09
CCDC6-203ENST00000518638 FAM177BA6PVY3 158 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 ITGB5P18084 799 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 ERCC3P19447 782 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 EPHA1P21709 976 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 CANXP27824 592 aaKnown RBP8.23□□□□□ -1.09
CCDC6-203ENST00000518638 ALDH1B1P30837 517 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
CCDC6-203ENST00000518638 NOGQ13253 232 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 ANKRD34AQ69YU3 496 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
CCDC6-203ENST00000518638 EHD4Q9H223 541 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 SOX13Q9UN79 622 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 ZNF652Q9Y2D9 606 aa8.23□□□□□ -1.09
CCDC6-203ENST00000518638 TM4SF5O14894 197 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 ATP2B2Q01814 1243 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 MSMPQ1L6U9 139 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 ALG1LQ6GMV1 187 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 SAPCD2Q86UD0 394 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 VSIG10LQ86VR7 867 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 BSNDQ8WZ55 320 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 MFSD14AQ96MC6 490 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 PSMD1Q99460 953 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
CCDC6-203ENST00000518638 ZNF277Q9NRM2 450 aaPredicted RBP8.22□□□□□ -1.09
CCDC6-203ENST00000518638 SAGE1Q9NXZ1 904 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 CCDC39Q9UFE4 941 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 LEMD3Q9Y2U8 911 aa8.22□□□□□ -1.09
CCDC6-203ENST00000518638 H3BRJ5 948 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 FSCN2O14926 492 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 GADD45BO75293 160 aaPredicted RBP8.21□□□□□ -1.1
CCDC6-203ENST00000518638 PRNPP04156 253 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 PREPP48147 710 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 SULT6B1Q6IMI4 303 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 CLEC4GQ6UXB4 293 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 UBASH3BQ8TF42 649 aa8.21□□□□□ -1.1
CCDC6-203ENST00000518638 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
CCDC6-203ENST00000518638 KLRG2A4D1S0 409 aaPredicted RBP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 METTL12A8MUP2 240 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 RNMTO43148 476 aaKnown RBP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 LDHBP07195 334 aaKnown RBP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 FOSL1P15407 271 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 GRIA4P48058 902 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 SLC39A6Q13433 755 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 GRM2Q14416 872 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 CPSF6Q16630 551 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 CST9Q5W186 159 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 PI16Q6UXB8 463 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 TPTE2Q6XPS3 522 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 NBPF5PQ86XG9 351 aaPredicted RBP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 TP53INP2Q8IXH6 220 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 ASAP3Q8TDY4 903 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 ADARB2Q9NS39 739 aaKnown RBP8.2□□□□□ -1.1
CCDC6-203ENST00000518638 CDHR2Q9BYE9 1310 aa8.2□□□□□ -1.1
CCDC6-203ENST00000518638 A0A096LPE4 126 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 AOC2O75106 756 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 CELF2O95319 508 aaKnown RBP8.19□□□□□ -1.1
CCDC6-203ENST00000518638 CDC25BP30305 580 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 SOX10P56693 466 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 VN1R5Q7Z5H4 357 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 SYNE4Q8N205 404 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 GLIS3Q8NEA6 775 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 ABCB6Q9NP58 842 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 HEG1Q9ULI3 1381 aa8.19□□□□□ -1.1
CCDC6-203ENST00000518638 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
CCDC6-203ENST00000518638 ADAM11O75078 769 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 CAMTA2O94983 1202 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 ITPKAP23677 461 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 FGD1P98174 961 aa8.18□□□□□ -1.1
CCDC6-203ENST00000518638 PKN2Q16513 984 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms