RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SYPP08247 313 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 FAM153BP0C7A2 387 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 SSTR4P31391 388 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 IKZF1Q13422 519 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 ANGEL2Q5VTE6 544 aaKnown RBP6.66□□□□□ -1.34
SQLE-202ENST00000518604 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 JAZF1Q86VZ6 243 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 SCUBE1Q8IWY4 988 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 SYNPOQ8N3V7 929 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 SYTL4Q96C24 671 aaPredicted RBP6.66□□□□□ -1.34
SQLE-202ENST00000518604 SLC12A9Q9BXP2 914 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 ARHGEF4Q9NR80 690 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 TMEM260Q9NX78 707 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 ZNF281Q9Y2X9 895 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 PCDHA11Q9Y5I1 949 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 CADPSQ9ULU8 1353 aa6.66□□□□□ -1.34
SQLE-202ENST00000518604 ENPP3O14638 875 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 AURKAO14965 403 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 VAMP4O75379 141 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 CANXP27824 592 aaKnown RBP6.65□□□□□ -1.34
SQLE-202ENST00000518604 RBM10P98175 930 aaKnown RBP6.65□□□□□ -1.34
SQLE-202ENST00000518604 EGR3Q06889 387 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 BNIP3Q12983 259 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 TMEM67Q5HYA8 995 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 SDE2Q6IQ49 451 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 RCSD1Q6JBY9 416 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 BTN2A2Q8WVV5 523 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 CCDC120Q96HB5 630 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 FCRL3Q96P31 734 aaPredicted RBP6.65□□□□□ -1.34
SQLE-202ENST00000518604 FOXP3Q9BZS1 431 aa6.65□□□□□ -1.34
SQLE-202ENST00000518604 ANGEL1Q9UNK9 670 aaKnown RBP6.65□□□□□ -1.34
SQLE-202ENST00000518604 MRPL42Q9Y6G3 142 aaKnown RBP6.65□□□□□ -1.34
SQLE-202ENST00000518604 DNAJC25-GNG10A0A024R161 153 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 CD3EP07766 207 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 TEKQ02763 1124 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 MAP4K2Q12851 820 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 EEF1DP3Q658K8 133 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 NSMFQ6X4W1 530 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 HOMER1Q86YM7 354 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 KCTD13Q8WZ19 329 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 APPBP2Q92624 585 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 COPS5Q92905 334 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 CDC6Q99741 560 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 GPR55Q9Y2T6 319 aaPredicted RBP6.64□□□□□ -1.35
SQLE-202ENST00000518604 BACE2Q9Y5Z0 518 aa6.64□□□□□ -1.35
SQLE-202ENST00000518604 TRBV23OR9-2A0A075B6M9 112 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 LOC105371045A0A1W2PR82 267 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 C2orf71A6NGG8 1288 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 TBX1O43435 398 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 SMARCA5O60264 1052 aaPredicted RBP6.63□□□□□ -1.35
SQLE-202ENST00000518604 WNT11O96014 354 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 CD8BP10966 210 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 PABPC1P11940 636 aaKnown RBP6.63□□□□□ -1.35
SQLE-202ENST00000518604 HSD3B2P26439 372 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 GFRA1P56159 465 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 SQSTM1Q13501 440 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 LRP8Q14114 963 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 DPY19L1Q2PZI1 675 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 RTP2Q5QGT7 225 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 SPRED2Q7Z698 418 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 AGBL5Q8NDL9 886 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 DHRS4Q9BTZ2 278 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 LGR4Q9BXB1 951 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 CARS2Q9HA77 564 aaKnown RBP6.63□□□□□ -1.35
SQLE-202ENST00000518604 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 PTCH2Q9Y6C5 1203 aa6.63□□□□□ -1.35
SQLE-202ENST00000518604 TRBV23-1A0A0A0MS06 115 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 PRODHO43272 600 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 CLSTN1O94985 981 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 SNRPB2P08579 225 aaKnown RBP6.62□□□□□ -1.35
SQLE-202ENST00000518604 GSTM1P09488 218 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 GRIA2P42262 883 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 SEPHS1P49903 392 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
SQLE-202ENST00000518604 ZP2Q05996 745 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 ZMYM1Q5SVZ6 1142 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 IQCEQ6IPM2 695 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 SLC23A3Q6PIS1 610 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 NLGN1Q8N2Q7 840 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 FLCNQ8NFG4 579 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 KISS1RQ969F8 398 aaPredicted RBP6.62□□□□□ -1.35
SQLE-202ENST00000518604 OSBP2Q969R2 916 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 MCMBPQ9BTE3 642 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 IER2Q9BTL4 223 aa6.62□□□□□ -1.35
SQLE-202ENST00000518604 TMEM82A0PJX8 343 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 STXBP3O00186 592 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 FGF10O15520 208 aaPredicted RBP6.61□□□□□ -1.35
SQLE-202ENST00000518604 DLX3O60479 287 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 TBC1D8O95759 1140 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 IFNGR1P15260 489 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 FUT4P22083 530 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 RPL10P27635 214 aaKnown RBP6.61□□□□□ -1.35
SQLE-202ENST00000518604 KCNJ6P48051 423 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 SCRN1Q12765 414 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 DUSP4Q13115 394 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 TESK1Q15569 626 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 ACBD5Q5T8D3 534 aaPredicted RBP6.61□□□□□ -1.35
SQLE-202ENST00000518604 E4F1Q66K89 784 aaPredicted RBP6.61□□□□□ -1.35
SQLE-202ENST00000518604 CYP2R1Q6VVX0 501 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms