RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TP53INP2Q8IXH6 220 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-207ENST00000518569 SLC12A9Q9BXP2 914 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 FOXP3Q9BZS1 431 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 LRP2BPQ9P2M1 347 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 ZMYM5Q9UJ78 669 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 A0A1W2PQU0 124 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 CCDC85CA6NKD9 419 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 BMS1Q14692 1282 aaKnown RBP5.6□□□□□ -1.51
VPS13B-207ENST00000518569 PPP2R5DQ14738 602 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 LONRF2Q1L5Z9 754 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 NOP9Q86U38 636 aaKnown RBP5.6□□□□□ -1.51
VPS13B-207ENST00000518569 ABI1Q8IZP0 508 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 PI4K2BQ8TCG2 481 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 PPP1R14AQ96A00 147 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 CCDC140Q96MF4 163 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 ZDHHC15Q96MV8 337 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 ALPK1Q96QP1 1244 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 CYP26B1Q9NR63 512 aa5.6□□□□□ -1.51
VPS13B-207ENST00000518569 AURKAO14965 403 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 KCNH1O95259 989 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 HOXC12P31275 282 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 DUSP4Q13115 394 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 HSP90AA2PQ14568 343 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-207ENST00000518569 PLCL1Q15111 1095 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 ZC3H12BQ5HYM0 836 aaKnown RBP5.59□□□□□ -1.51
VPS13B-207ENST00000518569 RTP2Q5QGT7 225 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 GTF2IRD2BQ6EKJ0 949 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 SPATC1Q76KD6 591 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 GTF2IRD2Q86UP8 949 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 JMYQ8N9B5 988 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 FCRL3Q96P31 734 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-207ENST00000518569 NKX2-4Q9H2Z4 354 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 PIF1Q9H611 641 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 ADGRE2Q9UHX3 823 aa5.59□□□□□ -1.51
VPS13B-207ENST00000518569 TMEM82A0PJX8 343 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 VAMP4O75379 141 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 SCG5P05408 212 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 CD3EP07766 207 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 PPP2R2AP63151 447 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
VPS13B-207ENST00000518569 EEF1DP3Q658K8 133 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 RCSD1Q6JBY9 416 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 LINC01599Q8WXQ3 324 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 FCRL2Q96LA5 508 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-207ENST00000518569 DNAJC7Q99615 494 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 AARSD1Q9BTE6 412 aaKnown RBP5.58□□□□□ -1.52
VPS13B-207ENST00000518569 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 MBNL3Q9NUK0 354 aaKnown RBP5.58□□□□□ -1.52
VPS13B-207ENST00000518569 TMEM59LQ9UK28 342 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 BACE2Q9Y5Z0 518 aa5.58□□□□□ -1.52
VPS13B-207ENST00000518569 KDM2BQ8NHM5 1336 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 FGF10O15520 208 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 CPP00450 1065 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 RNASE1P07998 156 aaKnown RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 GSTM1P09488 218 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 ZGLP1P0C6A0 271 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 FGFR1P11362 822 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 RPL10P27635 214 aaKnown RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 GDNFP39905 211 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 KIR2DL2P43627 348 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 RBM10P98175 930 aaKnown RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 ZNF792Q3KQV3 632 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 CYP2R1Q6VVX0 501 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 WAPLQ7Z5K2 1190 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 ZBTB38Q8NAP3 1195 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 THAP3Q8WTV1 239 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 BTN2A2Q8WVV5 523 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 COPS5Q92905 334 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 MCMBPQ9BTE3 642 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 G6PC3Q9BUM1 346 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 ADAMTS10Q9H324 1103 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 CWC22Q9HCG8 908 aaKnown RBP5.57□□□□□ -1.52
VPS13B-207ENST00000518569 ARHGEF4Q9NR80 690 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 AP5S1Q9NUS5 200 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 SLAMF8Q9P0V8 285 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 TNFRSF10DQ9UBN6 386 aa5.57□□□□□ -1.52
VPS13B-207ENST00000518569 DNAJC25-GNG10A0A024R161 153 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 TRBV23OR9-2A0A075B6M9 112 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 TRAV20A0A0B4J274 112 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 C2orf71A6NGG8 1288 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 TBX1O43435 398 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 ADCY3O60266 1144 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 DIAPH1O60610 1272 aaKnown RBP5.56□□□□□ -1.52
VPS13B-207ENST00000518569 FKTNO75072 461 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 IFNGR1P15260 489 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 CHRNEQ04844 493 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 DPY19L1Q2PZI1 675 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 RALGPS1Q5JS13 557 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 SPPL2CQ8IUH8 684 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 PDZD8Q8NEN9 1154 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 MAP6Q96JE9 813 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 CDADC1Q9BWV3 514 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 PRDM7Q9NQW5 492 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 ERVK13-1Q9NX77 482 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 PFDN2Q9UHV9 154 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms