RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 CCDC192P0DO97 292 aa26.68■■□□□ 1.86
SLIT3-204ENST00000518140 PRAMEF18Q5VWM3 479 aa26.68■■□□□ 1.86
SLIT3-204ENST00000518140 FAM177A1Q8N128 213 aaPredicted RBP26.68■■□□□ 1.86
SLIT3-204ENST00000518140 GPC2Q8N158 579 aa26.68■■□□□ 1.86
SLIT3-204ENST00000518140 ANP32BQ92688 251 aaKnown RBP26.68■■□□□ 1.86
SLIT3-204ENST00000518140 SDF4Q9BRK5 362 aa26.68■■□□□ 1.86
SLIT3-204ENST00000518140 TMX2Q9Y320 296 aa26.68■■□□□ 1.86
SLIT3-204ENST00000518140 A0A087WWV3 80 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 TMEM232C9JQI7 657 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 GNA11P29992 359 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 SYKP43405 635 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 NBPF12Q5TAG4 269 aaPredicted RBP26.67■■□□□ 1.86
SLIT3-204ENST00000518140 ARHGEF10LQ9HCE6 1279 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 BMP3P12645 472 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 HIRAP54198 1017 aaPredicted RBP26.67■■□□□ 1.86
SLIT3-204ENST00000518140 QRICH1Q2TAL8 776 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 ANGEL2Q5VTE6 544 aaKnown RBP26.67■■□□□ 1.86
SLIT3-204ENST00000518140 JAKMIP3Q5VZ66 844 aa26.67■■□□□ 1.86
SLIT3-204ENST00000518140 ESYT2A0FGR8 921 aa26.66■■□□□ 1.86
SLIT3-204ENST00000518140 ATP2C1P98194 919 aaPredicted RBP26.66■■□□□ 1.86
SLIT3-204ENST00000518140 C4orf32Q8N8J7 132 aa26.66■■□□□ 1.86
SLIT3-204ENST00000518140 KCNH3Q9ULD8 1083 aa26.66■■□□□ 1.86
SLIT3-204ENST00000518140 hCG_1984214I3L0E3 225 aa26.66■■□□□ 1.86
SLIT3-204ENST00000518140 CTAGE5O15320 804 aa26.66■■□□□ 1.86
SLIT3-204ENST00000518140 DDNO94850 711 aaPredicted RBP26.66■■□□□ 1.86
SLIT3-204ENST00000518140 ZYXQ15942 572 aaKnown RBP26.66■■□□□ 1.86
SLIT3-204ENST00000518140 IL17AQ16552 155 aa26.66■■□□□ 1.86
SLIT3-204ENST00000518140 ZNF713Q8N859 430 aaPredicted RBP26.66■■□□□ 1.86
SLIT3-204ENST00000518140 ZNF579Q8NAF0 562 aaKnown RBP26.65■■□□□ 1.86
SLIT3-204ENST00000518140 MORC2Q9Y6X9 1032 aaPredicted RBP26.65■■□□□ 1.86
SLIT3-204ENST00000518140 SBF1O95248 1867 aa26.65■■□□□ 1.86
SLIT3-204ENST00000518140 CDC37Q16543 378 aaPredicted RBP26.64■■□□□ 1.86
SLIT3-204ENST00000518140 LONRF3Q496Y0 759 aa26.64■■□□□ 1.86
SLIT3-204ENST00000518140 ADCY7P51828 1080 aa26.64■■□□□ 1.85
SLIT3-204ENST00000518140 IKQ13123 557 aaPredicted RBP26.64■■□□□ 1.85
SLIT3-204ENST00000518140 SASS6Q6UVJ0 657 aa26.64■■□□□ 1.85
SLIT3-204ENST00000518140 REXO1Q8N1G1 1221 aaKnown RBP26.64■■□□□ 1.85
SLIT3-204ENST00000518140 NAP1L5Q96NT1 182 aaPredicted RBP26.64■■□□□ 1.85
SLIT3-204ENST00000518140 RNF181Q9P0P0 153 aa26.64■■□□□ 1.85
SLIT3-204ENST00000518140 BMP15O95972 392 aa26.63■■□□□ 1.85
SLIT3-204ENST00000518140 EPSTI1Q96J88 318 aa26.63■■□□□ 1.85
SLIT3-204ENST00000518140 SYNPO2Q9UMS6 1093 aa26.63■■□□□ 1.85
SLIT3-204ENST00000518140 FZD1Q9UP38 647 aa26.63■■□□□ 1.85
SLIT3-204ENST00000518140 TAL1P17542 331 aaPredicted RBP26.62■■□□□ 1.85
SLIT3-204ENST00000518140 UBE2SQ16763 222 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 ANO6Q4KMQ2 910 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 FAM83BQ5T0W9 1011 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 SYDE2Q5VT97 1194 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 KRT25Q7Z3Z0 450 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 TMEM60Q9H2L4 133 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 VWA3AA6NCI4 1184 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 ASNSP08243 561 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 RIC8AQ9NPQ8 531 aa26.62■■□□□ 1.85
SLIT3-204ENST00000518140 DICER1Q9UPY3 1922 aaKnown RBP26.62■■□□□ 1.85
SLIT3-204ENST00000518140 NONOQ15233 471 aaKnown RBP eCLIP26.61■■□□□ 1.85
SLIT3-204ENST00000518140 BTNL9Q6UXG8 535 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 TBCKQ8TEA7 893 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 FERMT2Q96AC1 680 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 GOPCQ9HD26 462 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 PCDHA1Q9Y5I3 950 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 EDIL3O43854 480 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 INPP5BP32019 993 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 TIGD1Q96MW7 591 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 VCPKMTQ9H867 229 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 FAM13BQ9NYF5 915 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 GGA3Q9NZ52 723 aa26.61■■□□□ 1.85
SLIT3-204ENST00000518140 POLR2DO15514 142 aaKnown RBP26.6■■□□□ 1.85
SLIT3-204ENST00000518140 PDILTQ8N807 584 aa26.6■■□□□ 1.85
SLIT3-204ENST00000518140 PRR12Q9ULL5 1215 aa26.6■■□□□ 1.85
SLIT3-204ENST00000518140 A0A087X0B3 334 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 LETM2Q2VYF4 491 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 PPP1R18Q6NYC8 613 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 DNAJC25Q9H1X3 360 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 KIAA1468Q9P260 1216 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 KRBA2Q6ZNG9 492 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 SYMPKQ92797 1274 aaKnown RBP26.59■■□□□ 1.85
SLIT3-204ENST00000518140 ZNF341Q9BYN7 854 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 PSTPIP2Q9H939 334 aa26.59■■□□□ 1.85
SLIT3-204ENST00000518140 FOXN1O15353 648 aa26.58■■□□□ 1.85
SLIT3-204ENST00000518140 C9orf131Q5VYM1 1079 aa26.58■■□□□ 1.85
SLIT3-204ENST00000518140 DLK2Q6UY11 383 aa26.58■■□□□ 1.85
SLIT3-204ENST00000518140 CCNT1O60563 726 aaKnown RBP26.58■■□□□ 1.84
SLIT3-204ENST00000518140 CLK2P49760 499 aaKnown RBP26.58■■□□□ 1.84
SLIT3-204ENST00000518140 DGKZQ13574 1117 aa26.58■■□□□ 1.84
SLIT3-204ENST00000518140 SERTAD1Q9UHV2 236 aa26.58■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L15C9J2P7 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L13C9JLJ4 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L11C9JVI0 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L18D6R9N7 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L22D6RA61 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L17D6RBQ6 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L19D6RCP7 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L20D6RJB6 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 CTNND1O60716 968 aaKnown RBP26.57■■□□□ 1.84
SLIT3-204ENST00000518140 STAT2P52630 851 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L24Q0WX57 530 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USH1GQ495M9 461 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 USP17L6PQ6QN14 398 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 NEK8Q86SG6 692 aa26.57■■□□□ 1.84
SLIT3-204ENST00000518140 APOBEC3FQ8IUX4 373 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms