RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 LMBR1LQ6UX01 489 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 KRBA2Q6ZNG9 492 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 PRICKLE2Q7Z3G6 844 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 ANKRD18AQ8IVF6 992 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CCAR1Q8IX12 1150 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 RTKN2Q8IZC4 609 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 TTLL11Q8NHH1 800 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 GRAPLQ8TC17 118 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 PANK1Q8TE04 598 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CSRNP1Q96S65 589 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CDC5LQ99459 802 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 IER2Q9BTL4 223 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 USP44Q9H0E7 712 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 ANKIB1Q9P2G1 1089 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 RNF112Q9ULX5 631 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 TTF2Q9UNY4 1162 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 HDAC5Q9UQL6 1122 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 INPP5FQ9Y2H2 1132 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 ABCC4O15439 1325 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CDHR2Q9BYE9 1310 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 SCN7AQ01118 1682 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 ANKRD18BA2A2Z9 1011 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 EIF1AYO14602 144 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 PRC1O43663 620 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 STK10O94804 968 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 GNAI3P08754 354 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 PDGFRBP09619 1106 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CTSHP09668 335 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 RHOQP17081 205 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 YY1P25490 414 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 GPC1P35052 558 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 PLA2G4AP47712 749 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 GYS2P54840 703 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 FOXO4P98177 505 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 EPHA10Q5JZY3 1008 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 INTS3Q68E01 1043 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 ALG1LQ6GMV1 187 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 DPP8Q6V1X1 898 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 SP8Q8IXZ3 490 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 TMEM57Q8N5G2 664 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 RNF217Q8TC41 542 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CELF1Q92879 486 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 SUCLG2Q96I99 432 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 RNPC3Q96LT9 517 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 MPHOSPH8Q99549 860 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 MTA3Q9BTC8 594 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 OXCT2Q9BYC2 517 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 BICC1Q9H694 974 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 GREM2Q9H772 168 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 METTL5Q9NRN9 209 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 RNF181Q9P0P0 153 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 ATP6V0A2Q9Y487 856 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 GOLGB1Q14789 3259 aaKnown RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 NCANO14594 1321 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 SPATA31C2B4DYI2 1134 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 TGFBR3LH3BV60 316 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 GNAI2P04899 355 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 CSF1RP07333 972 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 XRCC5P13010 732 aaKnown RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 GNA15P30679 374 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 PHKA2P46019 1235 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 CASP7P55210 303 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 GPSM2P81274 684 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 ATP2B2Q01814 1243 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 LDHAL6AQ6ZMR3 332 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 SLC51AQ86UW1 340 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 MRFAP1L1Q96HT8 127 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 SUSD3Q96L08 255 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 MEIS3Q99687 375 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 PLA2G12BQ9BX93 195 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 TAOK3Q9H2K8 898 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 KANSL2Q9H9L4 492 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 POLMQ9NP87 494 aaPredicted RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 ZNF277Q9NRM2 450 aaPredicted RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 CNNM1Q9NRU3 951 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 VTI1BQ9UEU0 232 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 USP20Q9Y2K6 914 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 LRRFIP2Q9Y608 721 aaKnown RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 AK5Q9Y6K8 562 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 UTYO14607 1347 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 HMGB1P1B2RPK0 211 aaPredicted RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 NFKBIEO00221 500 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 ENPP3O14638 875 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 PRRG2O14669 202 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 FGRP09769 529 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 RLBP1P12271 317 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 LMNB1P20700 586 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 BDNFP23560 247 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 GRNP28799 593 aaKnown RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 KCNJ4P48050 445 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 AOC3Q16853 763 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 C8orf34Q49A92 452 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 GNASQ5JWF2 1037 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 ODR4Q5SWX8 454 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 C20orf194Q5TEA3 1177 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 ANKRD44Q8N8A2 993 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 SUPT20HQ8NEM7 779 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 AIDAQ96BJ3 306 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 KAZALD1Q96I82 304 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms