RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HVCN1Q96D96 273 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 LGR6Q9HBX8 967 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 GUCY2CP25092 1073 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 POLE2P56282 527 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 BSPRYQ5W0U4 402 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 RSAD2Q8WXG1 361 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 RNF34Q969K3 372 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 DSCC1Q9BVC3 393 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 TRIM6Q9C030 488 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-214ENST00000515035 MLH3Q9UHC1 1453 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 HIBADHP31937 336 aaKnown RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 ADCY7P51828 1080 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 TAF11Q15544 211 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 HIBCHQ6NVY1 386 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 FBXO38Q6PIJ6 1188 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 IL9RQ01113 521 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 ICE2Q659A1 982 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 TEX11Q8IYF3 940 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 SH2D4AQ9H788 454 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 SAP30BPQ9UHR5 308 aaKnown RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 SCOCQ9UIL1 159 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 ZKSCAN8Q15776 578 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 NAA35Q5VZE5 725 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 NXNQ6DKJ4 435 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 RUNDC3BQ96NL0 473 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 STK24Q9Y6E0 443 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 IBTKQ9P2D0 1353 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 PTPRTO14522 1441 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 RGS12O14924 1447 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 CTNND1O60716 968 aaKnown RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 HEXIM1O94992 359 aaKnown RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 A1BGP04217 495 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 STRN3Q13033 797 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 LRRC23Q53EV4 343 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 ARMC9Q7Z3E5 817 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 MYOCDQ8IZQ8 938 aa14.57□□□□□ -0.08
TCOF1-214ENST00000515035 ACTR5Q9H9F9 607 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-214ENST00000515035 SART1O43290 800 aaKnown RBP14.56□□□□□ -0.08
TCOF1-214ENST00000515035 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 PFKFB2O60825 505 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 PNMA6AP0CW24 399 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-214ENST00000515035 ABTB1Q969K4 478 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-214ENST00000515035 PTH1RQ03431 593 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 MMS22LQ6ZRQ5 1243 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 EPB41L5Q9HCM4 733 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 PASKQ96RG2 1323 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 POLR2FP61218 127 aaKnown RBP14.56□□□□□ -0.08
TCOF1-214ENST00000515035 GOLGA8FQ08AF8 430 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 GOLGA8DPQ0D2H9 430 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 RDH13Q8NBN7 331 aa14.56□□□□□ -0.08
TCOF1-214ENST00000515035 PDE6BP35913 854 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 COPB1P53618 953 aaKnown RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 NLRP7Q8WX94 980 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 ARMCX3Q9UH62 379 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 PCDHA5Q9Y5H7 936 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 ATF2P15336 505 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 MAGEA9P43362 315 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 EIF6P56537 245 aaKnown RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 PDCD7Q8N8D1 485 aaKnown RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 CD2APQ9Y5K6 639 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 A0A1W2PQ27 194 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 A0A1W2PQ64 194 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 A0A1W2PQD8 194 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 PDZD8Q8NEN9 1154 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 CLIC6Q96NY7 704 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 UIMC1Q96RL1 719 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 NT5C3AQ9H0P0 336 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 SPTLC3Q9NUV7 552 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 GRM1Q13255 1194 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 NNTQ13423 1086 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 CASP8Q14790 479 aa14.55□□□□□ -0.08
TCOF1-214ENST00000515035 FAM133BQ5BKY9 247 aaKnown RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 DPP8Q6V1X1 898 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 DACT3Q96B18 629 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 TRPC5Q9UL62 973 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-214ENST00000515035 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 SKIP12755 728 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 RNASELQ05823 741 aaKnown RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 REXO1Q8N1G1 1221 aaKnown RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 PROCA1Q8NCQ7 364 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 SUCLG2Q96I99 432 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 RAB20Q9NX57 234 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 GJA3Q9Y6H8 435 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 MBD5Q9P267 1494 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 RASSF7Q02833 373 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 DNAJC8O75937 253 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 RCN2Q14257 317 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 DPCR1Q3MIW9 517 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 ADGBQ8N7X0 1667 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 PHEXP78562 749 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 C11orf57Q6ZUT1 292 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-214ENST00000515035 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
TCOF1-214ENST00000515035 SPDL1Q96EA4 605 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms