RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 PSPNO60542 156 aa9.49□□□□□ -0.89
TRAPPC11-210ENST00000513600 NLRX1Q86UT6 975 aa9.49□□□□□ -0.89
TRAPPC11-210ENST00000513600 ARHGEF39Q8N4T4 335 aa9.49□□□□□ -0.89
TRAPPC11-210ENST00000513600 ADCY4Q8NFM4 1077 aa9.49□□□□□ -0.89
TRAPPC11-210ENST00000513600 APBA2Q99767 749 aa9.49□□□□□ -0.89
TRAPPC11-210ENST00000513600 ZNF408Q9H9D4 720 aa9.49□□□□□ -0.89
TRAPPC11-210ENST00000513600 A0A1W2PQ45 241 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 A0A1W2PQY0 241 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 WTIPA6NIX2 430 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 IRF2BP1Q8IU81 584 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 NAT16Q8N8M0 369 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 SHISA4Q96DD7 197 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 FAM84AQ96KN4 292 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 FCRL3Q96P31 734 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 NSUN3Q9H649 340 aaKnown RBP9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 CRTAC1Q9NQ79 661 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 GPR55Q9Y2T6 319 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
TRAPPC11-210ENST00000513600 CD3EP07766 207 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 MESP2Q0VG99 397 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 GRB10Q13322 594 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 FXNQ16595 210 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 CYP2R1Q6VVX0 501 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 DIRC2Q96SL1 478 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 SLC38A3Q99624 504 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 EPB41L4BQ9H329 900 aa9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 CGGBP1Q9UFW8 167 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC11-210ENST00000513600 FGF10O15520 208 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 HLA-DQA1Q5Y7H0 255 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 C6orf15Q6UXA7 325 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 SLCO6A1Q86UG4 719 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 KSR1Q8IVT5 923 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 FAM178BQ8IXR5 827 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 KRTAP9-2Q9BYQ4 174 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 AKT3Q9Y243 479 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 TAF6LQ9Y6J9 622 aa9.46□□□□□ -0.9
TRAPPC11-210ENST00000513600 HSF5Q4G112 596 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC11-210ENST00000513600 NAALADL2Q58DX5 795 aa9.45□□□□□ -0.9
TRAPPC11-210ENST00000513600 CRACR2BQ8N4Y2 399 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC11-210ENST00000513600 ZNF513Q8N8E2 541 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC11-210ENST00000513600 FBXO15Q8NCQ5 510 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC11-210ENST00000513600 AURKAO14965 403 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 VAMP4O75379 141 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 IFNGR1P15260 489 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 PNLIPP16233 465 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 CEBPAP49715 358 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 AMPD2Q01433 879 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 RCSD1Q6JBY9 416 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 POMZP3Q6PJE2 187 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 SIRT2Q8IXJ6 389 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 BHLHE22Q8NFJ8 381 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 PTCHD1Q96NR3 888 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
TRAPPC11-210ENST00000513600 NOP56O00567 594 aaKnown RBP9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 DDAH1O94760 285 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 TBC1D8O95759 1140 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 EFEMP2O95967 443 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 C8AP07357 584 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 PDE6BP35913 854 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 PKN1Q16512 942 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 EEF1DP3Q658K8 133 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 BVESQ8NE79 360 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 APEX2Q9UBZ4 518 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
TRAPPC11-210ENST00000513600 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 ARL4AP40617 200 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 GALK1P51570 392 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 LAPTM5Q13571 262 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 ANKS3Q6ZW76 656 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 C8orf37Q96NL8 207 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 JMJD8Q96S16 334 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 PPP1R16BQ96T49 567 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 MCMBPQ9BTE3 642 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 ACSL6Q9UKU0 697 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 BACE2Q9Y5Z0 518 aa9.42□□□□□ -0.9
TRAPPC11-210ENST00000513600 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 PRKCAP17252 672 aa9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 DPY19L1Q2PZI1 675 aa9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 PPP1R14AQ96A00 147 aa9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 KRTAP4-12Q9BQ66 201 aa9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 ZNF552Q9H707 407 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC11-210ENST00000513600 A0A1W2PQ27 194 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 A0A1W2PQ64 194 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 A0A1W2PQC6 194 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 A0A1W2PQD8 194 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 OR14I1A6ND48 311 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 B2RBV5 119 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 STXBP3O00186 592 aa9.4□□□□□ -0.9
TRAPPC11-210ENST00000513600 SEPHS1P49903 392 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms