RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 CTU1Q7Z7A3 348 aaKnown RBP18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 CHST13Q8NET6 341 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 ARHGAP39Q9C0H5 1083 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 EFCC1Q9HA90 598 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 HTTP42858 3142 aa18.07■□□□□ 0.48
POLR2J3-218ENST00000513506 CCDC196A0A1B0GTZ2 297 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 HOXC6P09630 235 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 ERCC3P19447 782 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 NEK4P51957 841 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 IKQ13123 557 aaPredicted RBP18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 IRF5Q13568 498 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 RABEP1Q15276 862 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 SRBD1Q8N5C6 995 aaKnown RBP18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 NUP133Q8WUM0 1156 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 SRRDQ9UH36 339 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 FBXO40Q9UH90 709 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 RIPK3Q9Y572 518 aa18.06■□□□□ 0.48
POLR2J3-218ENST00000513506 SLC15A5A6NIM6 579 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 ZBTB5O15062 677 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 IGHA2P01877 340 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 PTPREP23469 700 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 HOXD10P28358 340 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 TRAF1Q13077 416 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 GRB14Q14449 540 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 RTN1Q16799 776 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 SNRNP48Q6IEG0 339 aaKnown RBP18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 GPR142Q7Z601 462 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 MICU3Q86XE3 530 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 RAVER2Q9HCJ3 691 aaKnown RBP18.05■□□□□ 0.48
POLR2J3-218ENST00000513506 PNMA6FA0A0J9YX94 578 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 TNPO2O14787 897 aaKnown RBP18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 XRCC5P13010 732 aaKnown RBP18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 AK2P54819 239 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 GHRHRQ02643 423 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 NTRK3Q16288 839 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 SOCS4Q8WXH5 440 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 COA7Q96BR5 231 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 CHMP4CQ96CF2 233 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
POLR2J3-218ENST00000513506 GOLGA8AA7E2F4 631 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 PFKFB2O60825 505 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 FMNL1O95466 1100 aaPredicted RBP18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 CDC27P30260 824 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 METAP2P50579 478 aaKnown RBP eCLIP18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 CDC37Q16543 378 aaPredicted RBP18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 QRICH1Q2TAL8 776 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 TPCN1Q9ULQ1 816 aa18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 ISY1Q9ULR0 285 aaKnown RBP18.03■□□□□ 0.48
POLR2J3-218ENST00000513506 DNAJC25-GNG10A0A024R161 153 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 PPP1R11O60927 126 aaPredicted RBP18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 IFNAR1P17181 557 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 RXRAP19793 462 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 ADD1P35611 737 aaKnown RBP18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 CPXCR1Q8N123 301 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 SAMD3Q8N6K7 520 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 CLEC4DQ8WXI8 215 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 CCPG1Q9ULG6 757 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 DIS3Q9Y2L1 958 aaKnown RBP18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 PTPN22Q9Y2R2 807 aa18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.48
POLR2J3-218ENST00000513506 CASP8AP2Q9UKL3 1982 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 ZNF236Q9UL36 1845 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 FCER1AP12319 257 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 PLS1Q14651 629 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 FBXO11Q86XK2 927 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 PXYLP1Q8TE99 480 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 PIGSQ96S52 555 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 NUDT12Q9BQG2 462 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 TRIM17Q9Y577 477 aa18.01■□□□□ 0.47
POLR2J3-218ENST00000513506 ABCB11O95342 1321 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 CNTNAP5Q8WYK1 1306 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 FLT3LGP49771 235 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 SNAP25P60880 206 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 PRKCZQ05513 592 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 MAP2K5Q13163 448 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 CCDC174Q6PII3 467 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 FBXO46Q6PJ61 603 aaPredicted RBP18■□□□□ 0.47
POLR2J3-218ENST00000513506 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
POLR2J3-218ENST00000513506 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
POLR2J3-218ENST00000513506 RRP36Q96EU6 259 aaKnown RBP18■□□□□ 0.47
POLR2J3-218ENST00000513506 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 RNF146Q9NTX7 359 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
POLR2J3-218ENST00000513506 LIMCH1Q9UPQ0 1083 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 IVNS1ABPQ9Y6Y0 642 aa18■□□□□ 0.47
POLR2J3-218ENST00000513506 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
POLR2J3-218ENST00000513506 ADORA2AP29274 412 aa17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 RAB11FIP4Q86YS3 637 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms