RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
PDPN-210ENST00000513143 CDC37Q16543 378 aaPredicted RBP14.49□□□□□ -0.09
PDPN-210ENST00000513143 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
PDPN-210ENST00000513143 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 PIBF1Q8WXW3 757 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 WASF1Q92558 559 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 PTPN18Q99952 460 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 ASCC2Q9H1I8 757 aaPredicted RBP14.49□□□□□ -0.09
PDPN-210ENST00000513143 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 SEC63Q9UGP8 760 aaKnown RBP14.49□□□□□ -0.09
PDPN-210ENST00000513143 KIF3AQ9Y496 699 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 A0A0G2JMZ2 1700 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
PDPN-210ENST00000513143 PDHXO00330 501 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 VWA5AO00534 786 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 SNAP25P60880 206 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 IRX3P78415 501 aaPredicted RBP14.48□□□□□ -0.09
PDPN-210ENST00000513143 NOGQ13253 232 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 QRICH1Q2TAL8 776 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 LBX2Q6XYB7 198 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 ATG4CQ96DT6 458 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 CAPNS2Q96L46 248 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 P2RX7Q99572 595 aaKnown RBP14.48□□□□□ -0.09
PDPN-210ENST00000513143 ZCCHC17Q9NP64 241 aaKnown RBP14.48□□□□□ -0.09
PDPN-210ENST00000513143 PNMA3Q9UL41 463 aa14.48□□□□□ -0.09
PDPN-210ENST00000513143 hCG_1984214I3L0E3 225 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 PPP1R11O60927 126 aaPredicted RBP14.47□□□□□ -0.09
PDPN-210ENST00000513143 ZBED4O75132 1171 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 DDIT3P35638 169 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 TM4SF4P48230 202 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 KIF23Q02241 960 aaPredicted RBP14.47□□□□□ -0.09
PDPN-210ENST00000513143 SREBF2Q12772 1141 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 ZNF713Q8N859 430 aaPredicted RBP14.47□□□□□ -0.09
PDPN-210ENST00000513143 REPS2Q8NFH8 660 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 AIFM3Q96NN9 605 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 ALG1Q9BT22 464 aa14.47□□□□□ -0.09
PDPN-210ENST00000513143 ZNF536O15090 1300 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 IGF2BP3O00425 579 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDPN-210ENST00000513143 PDCP20941 246 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 HERVK_113P62684 666 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 LARP1BQ659C4 914 aaKnown RBP14.46□□□□□ -0.09
PDPN-210ENST00000513143 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 POTEEQ6S8J3 1075 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 FBXO11Q86XK2 927 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 IFNL1Q8IU54 200 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 FAM177A1Q8N128 213 aaPredicted RBP14.46□□□□□ -0.09
PDPN-210ENST00000513143 MB21D1Q8N884 522 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 RGS22Q8NE09 1264 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 ZIC5Q96T25 663 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 AMNQ9BXJ7 453 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 SH3GLB2Q9NR46 395 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 BARHL2Q9NY43 387 aa14.46□□□□□ -0.09
PDPN-210ENST00000513143 STXBP3O00186 592 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 ATP2A1O14983 1001 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 ICAM1P05362 532 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 OAZ1P54368 228 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 C1QTNF8P60827 252 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 HTRA3P83110 453 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 TRAF1Q13077 416 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 GRM1Q13255 1194 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 CCDC174Q6PII3 467 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 HEATR3Q7Z4Q2 680 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 GTF3C2Q8WUA4 911 aaPredicted RBP14.45□□□□□ -0.1
PDPN-210ENST00000513143 GPKOWQ92917 476 aaPredicted RBP eCLIP14.45□□□□□ -0.1
PDPN-210ENST00000513143 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 C8orf76Q96K31 380 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 PNMA2Q9UL42 364 aa14.45□□□□□ -0.1
PDPN-210ENST00000513143 WDR33Q9C0J8 1336 aaKnown RBP14.44□□□□□ -0.1
PDPN-210ENST00000513143 AOC2O75106 756 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 CYP2C8P10632 490 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 PDIA4P13667 645 aaKnown RBP14.44□□□□□ -0.1
PDPN-210ENST00000513143 XBP1P17861 261 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 SYT1P21579 422 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 TMEM132BQ14DG7 1078 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 COA7Q96BR5 231 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 PARK7Q99497 189 aaKnown RBP14.44□□□□□ -0.1
PDPN-210ENST00000513143 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
PDPN-210ENST00000513143 GJB4Q9NTQ9 266 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 VPS54Q9P1Q0 977 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 ZNF214Q9UL59 606 aaPredicted RBP14.44□□□□□ -0.1
PDPN-210ENST00000513143 CTDP1Q9Y5B0 961 aaPredicted RBP14.44□□□□□ -0.1
PDPN-210ENST00000513143 PCDHA1Q9Y5I3 950 aa14.44□□□□□ -0.1
PDPN-210ENST00000513143 CNMDO75829 334 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 HSPA6P17066 643 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 MAP2K2P36507 400 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 GCLCP48506 637 aaPredicted RBP14.43□□□□□ -0.1
PDPN-210ENST00000513143 VEGFBP49765 207 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 TRIM29Q14134 588 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 KRT40Q6A162 431 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 PPP1R18Q6NYC8 613 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 CPXCR1Q8N123 301 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 CCDC12Q8WUD4 166 aaPredicted RBP14.43□□□□□ -0.1
PDPN-210ENST00000513143 AGBL1Q96MI9 1066 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 PHF20Q9BVI0 1012 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 BTBD7Q9P203 1132 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms