RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 UBE2FQ969M7 185 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 RNPC3Q96LT9 517 aaKnown RBP5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 HSPA12BQ96MM6 686 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 ZDHHC15Q96MV8 337 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 HDAC8Q9BY41 377 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 DUSP15Q9H1R2 295 aaPredicted RBP5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 DUSP13Q9UII6 198 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 ST14Q9Y5Y6 855 aa5.73□□□□□ -1.49
CALCOCO2-220ENST00000511816 MEIS1O00470 390 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 PPP2R2AP63151 447 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 TCEA2Q15560 299 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 RNF111Q6ZNA4 994 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 JAZF1Q86VZ6 243 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 PI4K2BQ8TCG2 481 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 KCTD13Q8WZ19 329 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 TCTN2Q96GX1 697 aa5.72□□□□□ -1.49
CALCOCO2-220ENST00000511816 TRBV23OR9-2A0A075B6M9 112 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 BIN1O00499 593 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 DIAPH1O60610 1272 aaKnown RBP5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 FGFR1P11362 822 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 NCLP19338 710 aaKnown RBP5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 KCNJ6P48051 423 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 BNIP3Q12983 259 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 NSMFQ6X4W1 530 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 KSR1Q8IVT5 923 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 LINC00116Q8NCU8 138 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 CCDC120Q96HB5 630 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 MRGPRX3Q96LB0 322 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 NKX2-4Q9H2Z4 354 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 PAK6Q9NQU5 681 aaPredicted RBP5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 CYP26B1Q9NR63 512 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 FANCLQ9NW38 375 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 TMEM260Q9NX78 707 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 PLAGL2Q9UPG8 496 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 PTCH2Q9Y6C5 1203 aa5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 OAS3Q9Y6K5 1087 aaKnown RBP5.71□□□□□ -1.5
CALCOCO2-220ENST00000511816 DNAJC25-GNG10A0A024R161 153 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 TRBV23-1A0A0A0MS06 115 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 SHISA3A0PJX4 238 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 H0Y8X5 98 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 CD3EP07766 207 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 SNRPB2P08579 225 aaKnown RBP5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 CD8BP10966 210 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 SEPHS1P49903 392 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 SUMO1P63165 101 aaKnown RBP5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 ZP2Q05996 745 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 GTF2IRD2BQ6EKJ0 949 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 C16orf86Q6ZW13 317 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 GTF2IRD2Q86UP8 949 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 CREG2Q8IUH2 290 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 ABI1Q8IZP0 508 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 ZNF513Q8N8E2 541 aaPredicted RBP5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 DHRS4Q9BTZ2 278 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 SEMA3GQ9NS98 782 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 TCFL5Q9UL49 500 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 PITPNM2Q9BZ72 1349 aa5.7□□□□□ -1.5
CALCOCO2-220ENST00000511816 ESYT3A0FGR9 886 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 PRODHO43272 600 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 EIF5BO60841 1220 aaKnown RBP5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 VAMP4O75379 141 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 SYPP08247 313 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 FAM153BP0C7A2 387 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 VAV1P15498 845 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 FUT4P22083 530 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 MAP4K2Q12851 820 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 DPY19L1Q2PZI1 675 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 EEF1DP3Q658K8 133 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 IQCEQ6IPM2 695 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 ZNF574Q6ZN55 896 aaPredicted RBP5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 NAT16Q8N8M0 369 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 BTN2A2Q8WVV5 523 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 IER2Q9BTL4 223 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 LMCD1Q9NZU5 365 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 GPR55Q9Y2T6 319 aaPredicted RBP5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 BACE2Q9Y5Z0 518 aa5.69□□□□□ -1.5
CALCOCO2-220ENST00000511816 C2orf71A6NGG8 1288 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 PPP1R12AO14974 1030 aaPredicted RBP5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 ADCY3O60266 1144 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 ADAMTS4O75173 837 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 TBC1D8O95759 1140 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 GSTM1P09488 218 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 PABPC1P11940 636 aaKnown RBP5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 NAT1P18440 290 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 EGR3Q06889 387 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 GAB4Q2WGN9 574 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 PLEKHG4Q58EX7 1191 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 RNF187Q5TA31 235 aaPredicted RBP5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 SLC23A3Q6PIS1 610 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 CRTC3Q6UUV7 619 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 CYP2R1Q6VVX0 501 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 USHBP1Q8N6Y0 703 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 FEZ1Q99689 392 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 CDADC1Q9BWV3 514 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 RC3H2Q9HBD1 1191 aaKnown RBP5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 ARHGEF4Q9NR80 690 aa5.68□□□□□ -1.5
CALCOCO2-220ENST00000511816 U3KQE9 123 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms