RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 KRT25Q7Z3Z0 450 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 RABGGTAQ92696 567 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 EYA3Q99504 573 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 TUBB2BQ9BVA1 445 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 CUEDC2Q9H467 287 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 MAGEF1Q9HAY2 307 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 PSMA7O14818 248 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 ZRANB2O95218 330 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 PARP1P09874 1014 aaKnown RBP20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 GOLGA8HP0CJ92 632 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 AK8Q96MA6 479 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 ZMYND12Q9H0C1 365 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 C6orf50Q9HD87 102 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 KBTBD4Q9NVX7 518 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 SBF2Q86WG5 1849 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 ATP8B1O43520 1251 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 PLCG2P16885 1265 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 EEF1GP26641 437 aaKnown RBP20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 GNA11P29992 359 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 KRT9P35527 623 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 CDK8P49336 464 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 ZNF569Q5MCW4 686 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 C16orf86Q6ZW13 317 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 ZNF771Q7L3S4 317 aaPredicted RBP20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 TEX11Q8IYF3 940 aa20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 CCDC47Q96A33 483 aaKnown RBP20.17■□□□□ 0.82
CCHCR1-228ENST00000509552 TOM1O60784 492 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 RHOBTB3O94955 611 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 NONOQ15233 471 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 RRP36Q96EU6 259 aaKnown RBP20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 GPR101Q96P66 508 aaPredicted RBP20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 THAP9Q9H5L6 903 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 MAGEC2Q9UBF1 373 aaPredicted RBP20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 ERVK-24P63145 666 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 CEP112Q8N8E3 955 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 NEDD1Q8NHV4 660 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 TRIM47Q96LD4 638 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 PLIN2Q99541 437 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 CD209Q9NNX6 404 aa20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 ZHX1Q9UKY1 873 aaPredicted RBP20.16■□□□□ 0.82
CCHCR1-228ENST00000509552 GPR75-ASB3A0A0A6YYF3 556 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 CTAGE9A4FU28 777 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 TRIM49BA6NDI0 452 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 KLRC4O43908 158 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 OR52Z1P0C646 297 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 ATP2B4P23634 1241 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 GPSM2P81274 684 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 TERF2Q15554 542 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 SLC51AQ86UW1 340 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 CABP7Q86V35 215 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 GIMAP8Q8ND71 665 aaPredicted RBP20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 ACRBPQ8NEB7 543 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 NOC3LQ8WTT2 800 aaKnown RBP20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 CDC23Q9UJX2 597 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 SMCO2A6NFE2 343 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 CCNT1O60563 726 aaKnown RBP20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 UFL1O94874 794 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 LETM2Q2VYF4 491 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 JAKMIP3Q5VZ66 844 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 SRGAP1Q7Z6B7 1085 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 IRF2BP1Q8IU81 584 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 SLF2Q8IX21 1173 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 MB21D1Q8N884 522 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 MYO1AQ9UBC5 1043 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 NHSQ6T4R5 1651 aa20.15■□□□□ 0.82
CCHCR1-228ENST00000509552 A0A0U1RQJ8 604 aa20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 A0A1W2PQC6 194 aa20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 LGALS16A8MUM7 142 aa20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 PES1O00541 588 aaKnown RBP20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 CHMP4BP1P59074 171 aa20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 ATRIPQ8WXE1 791 aa20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 EPC1Q9H2F5 836 aa20.14■□□□□ 0.82
CCHCR1-228ENST00000509552 SMARCA1P28370 1054 aa20.14■□□□□ 0.81
CCHCR1-228ENST00000509552 TSR1Q2NL82 804 aaKnown RBP20.14■□□□□ 0.81
CCHCR1-228ENST00000509552 NEK8Q86SG6 692 aa20.14■□□□□ 0.81
CCHCR1-228ENST00000509552 DHTKD1Q96HY7 919 aaPredicted RBP20.14■□□□□ 0.81
CCHCR1-228ENST00000509552 GGA1Q9UJY5 639 aa20.14■□□□□ 0.81
CCHCR1-228ENST00000509552 RNF225M0QZC1 329 aaPredicted RBP20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 TUBB4BP68371 445 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 FAM182BQ5T319 152 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 FAM196AQ6ZSG2 479 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 PARD6BQ9BYG5 372 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 LUC7L2Q9Y383 392 aaKnown RBP20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 FLT1P17948 1338 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 MYH8P13535 1937 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 IL1R1P14778 569 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 PLCG1P19174 1290 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 PMS1P54277 932 aaKnown RBP20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 FAM193AP78312 1265 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 CC2D1AQ6P1N0 951 aaPredicted RBP20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 SLC35F6Q8N357 371 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 OR8K1Q8NGG5 319 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 CPVLQ9H3G5 476 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 ARFGAP3Q9NP61 516 aa20.13■□□□□ 0.81
CCHCR1-228ENST00000509552 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms