RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 SPRYD3Q8NCJ5 442 aa16.54■□□□□ 0.24
SPOCK1-206ENST00000509293 ASCC2Q9H1I8 757 aaPredicted RBP16.54■□□□□ 0.24
SPOCK1-206ENST00000509293 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
SPOCK1-206ENST00000509293 RLFQ13129 1914 aa16.54■□□□□ 0.24
SPOCK1-206ENST00000509293 SPDYE16A6NNV3 312 aaPredicted RBP16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 ZBED4O75132 1171 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 CCDC12Q8WUD4 166 aaPredicted RBP16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 AMNQ9BXJ7 453 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 PARP14Q460N5 1801 aa16.53■□□□□ 0.24
SPOCK1-206ENST00000509293 hCG_1642624A0A1W2PR95 340 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 ESYT2A0FGR8 921 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 PPFIA3O75145 1194 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 ICAM1P05362 532 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 SYT1P21579 422 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 TM4SF4P48230 202 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 MKRN3Q13064 507 aaKnown RBP16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 WWC2Q6AWC2 1192 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 OTUD7BQ6GQQ9 843 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 REPS2Q8NFH8 660 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 CCDC148Q8NFR7 591 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 ATG4CQ96DT6 458 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 PTPN18Q99952 460 aa16.52■□□□□ 0.24
SPOCK1-206ENST00000509293 MYH6P13533 1939 aa16.52■□□□□ 0.23
SPOCK1-206ENST00000509293 STXBP3O00186 592 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 PDHXO00330 501 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 PPP1R11O60927 126 aaPredicted RBP16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 HERVK_113P62684 666 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 TRIM29Q14134 588 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 CAPNS2Q96L46 248 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 P2RX7Q99572 595 aaKnown RBP16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 MAF1Q9H063 256 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 GLT8D2Q9H1C3 349 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 PCDHA1Q9Y5I3 950 aa16.51■□□□□ 0.23
SPOCK1-206ENST00000509293 ZNF536O15090 1300 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 STX6O43752 255 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 DTNBO60941 627 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 CALML3P27482 149 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 NUCB2P80303 420 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 KRT40Q6A162 431 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 CYP4F22Q6NT55 531 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 IFNL1Q8IU54 200 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 FAM43AQ8N2R8 423 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 PARK7Q99497 189 aaKnown RBP16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 PHF20Q9BVI0 1012 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
SPOCK1-206ENST00000509293 ABCB11O95342 1321 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 A0A0G2JMZ2 1700 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 MAP2K2P36507 400 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 GCLCP48506 637 aaPredicted RBP16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 TKFCQ3LXA3 575 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 DAGLBQ8NCG7 672 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 TEX13BQ9BXU2 312 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 CHMP5Q9NZZ3 219 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 ZNF214Q9UL59 606 aaPredicted RBP16.49■□□□□ 0.23
SPOCK1-206ENST00000509293 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 H3BQV1 296 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 MMP1P03956 469 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 GNA11P29992 359 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 COPB2P35606 906 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 NAPAP54920 295 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 SNAP25P60880 206 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 KIF23Q02241 960 aaPredicted RBP16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 TMEM132BQ14DG7 1078 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 POTEEQ6S8J3 1075 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 CCPG1Q9ULG6 757 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 MTMR6Q9Y217 621 aa16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 MRPL11Q9Y3B7 192 aaKnown RBP16.48■□□□□ 0.23
SPOCK1-206ENST00000509293 BRD1O95696 1058 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 STAT3P40763 770 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 NLRP5P59047 1200 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 NPY5RQ15761 445 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 BICD2Q8TD16 824 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 COA7Q96BR5 231 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
SPOCK1-206ENST00000509293 RBPJLQ9UBG7 517 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms