RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 NUDT19A8MXV4 375 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 GREM1O60565 184 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 PRKCAP17252 672 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 PTMSP20962 102 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 ARL4AP40617 200 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 CLCQ05315 142 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 LAPTM5Q13571 262 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 SEZ6Q53EL9 994 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 GK5Q6ZS86 529 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 NOL8Q76FK4 1167 aaKnown RBP4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 NLRC3Q7RTR2 1065 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 LDHDQ86WU2 507 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 CERS3Q8IU89 383 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 NUP43Q8NFH3 380 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 ZNF296Q8WUU4 475 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 MKRN2Q9H000 416 aaKnown RBP4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 ANTXR1Q9H6X2 564 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 KCNQ5Q9NR82 932 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 ERVK13-1Q9NX77 482 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 FBXL21Q9UKT6 434 aa4.96□□□□□ -1.62
HMGB3P15-201ENST00000507326 ITGAEP38570 1179 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 CTSKP43235 329 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 NCKAP1LP55160 1127 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 CYP4F8P98187 520 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 SETQ01105 290 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 CRTC3Q6UUV7 619 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 FAM129CQ86XR2 697 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 IGDCC3Q8IVU1 814 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 TMEM192Q8IY95 271 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 SYT8Q8NBV8 401 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 CXorf38Q8TB03 319 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 EHMT1Q9H9B1 1298 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 UBP1Q9NZI7 540 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 JAG2Q9Y219 1238 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 PCDHB12Q9Y5F1 795 aa4.95□□□□□ -1.62
HMGB3P15-201ENST00000507326 ZNF205O95201 554 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 NME1P15531 152 aaKnown RBP4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 ENDOUP21128 410 aaKnown RBP4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 MCM4P33991 863 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 BMP8BP34820 402 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 CEBPAP49715 358 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 TMEM62Q0P6H9 643 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 SF3A1Q15459 793 aaKnown RBP4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 SKOR2Q2VWA4 1001 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 SP8Q8IXZ3 490 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 PWWP2AQ96N64 755 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 SLC6A18Q96N87 628 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 MYH16Q9H6N6 1097 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 TNFRSF12AQ9NP84 129 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 IMPACTQ9P2X3 320 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 ADAMTS1Q9UHI8 967 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 GGT7Q9UJ14 662 aa4.94□□□□□ -1.62
HMGB3P15-201ENST00000507326 A0A1W2PQ45 241 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 A0A1W2PQY0 241 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 FAM86C2PA6NEL3 165 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 BUB1BO60566 1050 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 VAV1P15498 845 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 CCNFP41002 786 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 APOBRQ0VD83 1088 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 AUHQ13825 339 aaKnown RBP4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 PRRT2Q7Z6L0 340 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 SREK1Q8WXA9 508 aaKnown RBP4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 JMJD8Q96S16 334 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 ADAM7Q9H2U9 754 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 ACSL6Q9UKU0 697 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 PCDHA5Q9Y5H7 936 aa4.93□□□□□ -1.62
HMGB3P15-201ENST00000507326 ANKRD62A6NC57 917 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 PLEKHD1A6NEE1 506 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 TNFRSF10CO14798 259 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 SMARCA5O60264 1052 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 CELA3BP08861 270 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 ZNF165P49910 485 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 RPTNQ6XPR3 784 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 REXO1Q8N1G1 1221 aaKnown RBP4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 TMEM52Q8NDY8 209 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 UBXN4Q92575 508 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 SLC9A7Q96T83 725 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 DSCC1Q9BVC3 393 aa4.92□□□□□ -1.62
HMGB3P15-201ENST00000507326 MEIS3P2A8K0S8 358 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 LIMS1P48059 325 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 KRTAP10-2P60368 255 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 CBX2Q14781 532 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 PLEKHN1Q494U1 663 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 RTP2Q5QGT7 225 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 GORABQ5T7V8 394 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 ERICH6BQ5W0A0 696 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 DBX2Q6ZNG2 339 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 HS2ST1Q7LGA3 356 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 NAT16Q8N8M0 369 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 LINC01356Q8N9X3 169 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 NKD1Q969G9 470 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 EAF1Q96JC9 268 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 C8orf37Q96NL8 207 aa4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 LUC7LQ9NQ29 371 aaKnown RBP4.91□□□□□ -1.62
HMGB3P15-201ENST00000507326 A0A1W2PQ27 194 aa4.9□□□□□ -1.63
HMGB3P15-201ENST00000507326 A0A1W2PQ64 194 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms