RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SEMA3GQ9NS98 782 aa8.59□□□□□ -1.03
HERC4-213ENST00000506515 MRPS23Q9Y3D9 190 aaKnown RBP8.59□□□□□ -1.03
HERC4-213ENST00000506515 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 STXBP3O00186 592 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 SYPP08247 313 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 ECI1P42126 302 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 TCEA2Q15560 299 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 THAP5Q7Z6K1 395 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 USHBP1Q8N6Y0 703 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 OSBP2Q969R2 916 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 MCMBPQ9BTE3 642 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 ATP13A1Q9HD20 1204 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 DUSP13Q9UII6 198 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 SNX11Q9Y5W9 270 aa8.58□□□□□ -1.04
HERC4-213ENST00000506515 ANKRD62A6NC57 917 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 IFNGR1P15260 489 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 VAV1P15498 845 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 LTKP29376 864 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 HOXC12P31275 282 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 BMP8BP34820 402 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 NOP2P46087 812 aaKnown RBP8.57□□□□□ -1.04
HERC4-213ENST00000506515 GFRA1P56159 465 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 PCBP3P57721 371 aaKnown RBP8.57□□□□□ -1.04
HERC4-213ENST00000506515 SCRN1Q12765 414 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 PRSS53Q2L4Q9 553 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 CREG2Q8IUH2 290 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 KISS1RQ969F8 398 aaPredicted RBP8.57□□□□□ -1.04
HERC4-213ENST00000506515 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 FCRL3Q96P31 734 aaPredicted RBP8.57□□□□□ -1.04
HERC4-213ENST00000506515 FOXP3Q9BZS1 431 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 SLKQ9H2G2 1235 aaPredicted RBP8.57□□□□□ -1.04
HERC4-213ENST00000506515 CYP26B1Q9NR63 512 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 TCFL5Q9UL49 500 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 CD2APQ9Y5K6 639 aa8.57□□□□□ -1.04
HERC4-213ENST00000506515 PITPNM2Q9BZ72 1349 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 CCDC163A0A0D9SF12 145 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 DLX3O60479 287 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 FKTNO75072 461 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
HERC4-213ENST00000506515 AOC3Q16853 763 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 GAB4Q2WGN9 574 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 KIAA0907Q7Z7F0 614 aaPredicted RBP8.56□□□□□ -1.04
HERC4-213ENST00000506515 TMEM145Q8NBT3 493 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 KCTD13Q8WZ19 329 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 FEZ1Q99689 392 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 SLC12A9Q9BXP2 914 aa8.56□□□□□ -1.04
HERC4-213ENST00000506515 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 GSTM1P09488 218 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 GYS2P54840 703 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
HERC4-213ENST00000506515 LINC00116Q8NCU8 138 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 GPRC5CQ9NQ84 441 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 PCDHA11Q9Y5I1 949 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 BACE2Q9Y5Z0 518 aa8.55□□□□□ -1.04
HERC4-213ENST00000506515 BLACEA4D250 179 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 C2orf71A6NGG8 1288 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 AURKAO14965 403 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 CPP00450 1065 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 TMPRSS7Q7RTY8 843 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 SYNPOQ8N3V7 929 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 ASB11Q8WXH4 323 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 CDADC1Q9BWV3 514 aa8.54□□□□□ -1.04
HERC4-213ENST00000506515 NCOA5Q9HCD5 579 aaKnown RBP8.54□□□□□ -1.04
HERC4-213ENST00000506515 ZNF205O95201 554 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 ESR1P03372 595 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 THBDP07204 575 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 GRIK1P39086 918 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 CD96P40200 585 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 SEPHS1P49903 392 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 PRKCQQ04759 706 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 EGR3Q06889 387 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 CYP4F3Q08477 520 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 MAP4K2Q12851 820 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 BNIP3Q12983 259 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 RNF111Q6ZNA4 994 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 COPS5Q92905 334 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
HERC4-213ENST00000506515 SCG5P05408 212 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 RPL10P27635 214 aaKnown RBP8.52□□□□□ -1.05
HERC4-213ENST00000506515 MSMPQ1L6U9 139 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 TAF7LQ5H9L4 462 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 RTP2Q5QGT7 225 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 USP53Q70EK8 1073 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 RNF112Q9ULX5 631 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 NACADO15069 1562 aa8.52□□□□□ -1.05
HERC4-213ENST00000506515 DNAJC25-GNG10A0A024R161 153 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 PLD2O14939 933 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.05
HERC4-213ENST00000506515 IKZF1Q13422 519 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 DALRD3Q5D0E6 543 aaKnown RBP8.51□□□□□ -1.05
HERC4-213ENST00000506515 SLC35F1Q5T1Q4 408 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 ZPBP2Q6X784 338 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 C1orf159Q96HA4 380 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 BSDC1Q9NW68 430 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms