RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CLEC1BQ9P126 229 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 CD207Q9UJ71 328 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 R4GN57 208 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 LCTP09848 1927 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 MYH1P12882 1939 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 HECTD1Q9ULT8 2610 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 MYO5AQ9Y4I1 1855 aaKnown RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 ASXL3Q9C0F0 2248 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 KIF16BQ96L93 1317 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 SALL1Q9NSC2 1324 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 PATJQ8NI35 1801 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 H3BNC9 293 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 PI15O43692 258 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 BAIAP3O94812 1187 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 BRD1O95696 1058 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 PGK2P07205 417 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 ASNSP08243 561 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 C6orf222P0C671 652 aaPredicted RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 IQCF3P0C7M6 154 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 LINC00271P0C7V0 271 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 CYP2C9P11712 490 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 NPR3P17342 541 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 PTGS1P23219 599 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 CLCN5P51795 746 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 RRP1P56182 461 aaKnown RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 RIPK4P57078 832 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 RING1Q06587 406 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 PICALMQ13492 652 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 ITGA7Q13683 1181 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 EPC2Q52LR7 807 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 NCBP3Q53F19 620 aaKnown RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 SOWAHCQ53LP3 525 aaPredicted RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L2Q6R6M4 530 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 LMBR1LQ6UX01 489 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 CXCL17Q6UXB2 119 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 EP400NLQ6ZTU2 488 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 CCDC105Q8IYK2 499 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 WDR66Q8TBY9 1149 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 SUSD6Q92537 303 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 FAM163AQ96GL9 167 aaPredicted RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 FGD4Q96M96 766 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 RAD9AQ99638 391 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 TMEM121BQ9BXQ6 578 aaPredicted RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 KATNBL1Q9H079 304 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 ALDH8A1Q9H2A2 487 aaPredicted RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 TRMT13Q9NUP7 481 aaKnown RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 ZBTB21Q9ULJ3 1066 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 ZMIZ1Q9ULJ6 1067 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 TRIM35Q9UPQ4 493 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 DIS3Q9Y2L1 958 aaKnown RBP4.26□□□□□ -1.73
TCOF1-208ENST00000506063 TICRRQ7Z2Z1 1910 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 PLXNA4Q9HCM2 1894 aa4.26□□□□□ -1.73
TCOF1-208ENST00000506063 SPTA1P02549 2419 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 CLSPNQ9HAW4 1339 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 GDF11O95390 407 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 GLP2RO95838 553 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 ACTN1P12814 892 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 RFC2P35250 354 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 TMPOP42166 694 aaKnown RBP4.25□□□□□ -1.73
TCOF1-208ENST00000506063 PSMC6P62333 389 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 HTRA4P83105 476 aaPredicted RBP4.25□□□□□ -1.73
TCOF1-208ENST00000506063 BEX3Q00994 111 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 DMWDQ09019 674 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 COASYQ13057 564 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 ADAM15Q13444 863 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 CAMK1Q14012 370 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 PTPROQ16827 1216 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 PPM1JQ5JR12 505 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 GNASQ5JWF2 1037 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 MAMDC4Q6UXC1 1216 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 G2E3Q7L622 706 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 DENND4AQ7Z401 1863 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 VPS37DQ86XT2 251 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 KDF1Q8NAX2 398 aaPredicted RBP4.25□□□□□ -1.73
TCOF1-208ENST00000506063 KAZALD1Q96I82 304 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 CTAGE1Q96RT6 745 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 HAUS7Q99871 368 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 PHF7Q9BWX1 381 aaPredicted RBP4.25□□□□□ -1.73
TCOF1-208ENST00000506063 MROH8Q9H579 483 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 CNNM1Q9NRU3 951 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 CTNNA3Q9UI47 895 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 HERC5Q9UII4 1024 aaKnown RBP4.25□□□□□ -1.73
TCOF1-208ENST00000506063 FAM184BQ9ULE4 1060 aa4.25□□□□□ -1.73
TCOF1-208ENST00000506063 USP15Q9Y4E8 981 aaPredicted RBP4.25□□□□□ -1.73
TCOF1-208ENST00000506063 LAMA1P25391 3075 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 ANKRD17O75179 2603 aaKnown RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 DNAJC25-GNG10A0A024R161 153 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 GPR75-ASB3A0A0A6YYF3 556 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 C1QTNF9BB2RNN3 333 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 PITPNM1O00562 1244 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 ZBTB22O15209 634 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 NCK2O43639 380 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 PDE8BO95263 885 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 DDX58O95786 925 aaKnown RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 LDHBP07195 334 aaKnown RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 C1QTNF9P0C862 333 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 ZNF853P0CG23 659 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 AOC1P19801 751 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms