RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 XBP1P17861 261 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 HERVK_113P62684 666 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 PKN1Q16512 942 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 CCDC174Q6PII3 467 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 HEATR3Q7Z4Q2 680 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 FBXO11Q86XK2 927 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 GTF3C2Q8WUA4 911 aaPredicted RBP15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 PTPN18Q99952 460 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 AMNQ9BXJ7 453 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 SLC38A10Q9HBR0 1119 aa15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 ZCCHC17Q9NP64 241 aaKnown RBP15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 LOC285556D6RIA3 1793 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 TM4SF4P48230 202 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 C1QTNF8P60827 252 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 TRIM29Q14134 588 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 IFNL1Q8IU54 200 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 ADAMTS5Q9UNA0 930 aa15.98■□□□□ 0.15
CYSTM1-202ENST00000504227 WDR33Q9C0J8 1336 aaKnown RBP15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 AOC2O75106 756 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 PDIA4P13667 645 aaKnown RBP15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 HSPA6P17066 643 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 LBX2Q6XYB7 198 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 CPXCR1Q8N123 301 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 SMCR8Q8TEV9 937 aaPredicted RBP15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 CCDC12Q8WUD4 166 aaPredicted RBP15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 AIFM3Q96NN9 605 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 PARK7Q99497 189 aaKnown RBP15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 SH3GLB2Q9NR46 395 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 BARHL2Q9NY43 387 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 PCDHA1Q9Y5I3 950 aa15.97■□□□□ 0.15
CYSTM1-202ENST00000504227 H3BQV1 296 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 IGF2BP3O00425 579 aaKnown RBP eCLIP15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 PPP1R11O60927 126 aaPredicted RBP15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 ICAM1P05362 532 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 CYP2C8P10632 490 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 MAP2K2P36507 400 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 VEGFBP49765 207 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 FOSBP53539 338 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 OAZ1P54368 228 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 HTRA3P83110 453 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 IFFO2Q5TF58 517 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 FAM177A1Q8N128 213 aaPredicted RBP15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 CCDC148Q8NFR7 591 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 COA7Q96BR5 231 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 ZIC5Q96T25 663 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 RAVER2Q9HCJ3 691 aaKnown RBP15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 CCPG1Q9ULG6 757 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 RABGAP1Q9Y3P9 1069 aa15.96■□□□□ 0.15
CYSTM1-202ENST00000504227 STXBP3O00186 592 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 ALDH1A1P00352 501 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 GCLCP48506 637 aaPredicted RBP15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 NAPAP54920 295 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 NLRP5P59047 1200 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 PLS1Q14651 629 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 TAF1CQ15572 869 aaPredicted RBP15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 USH1GQ495M9 461 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 RGS22Q8NE09 1264 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 REPS2Q8NFH8 660 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 AGBL1Q96MI9 1066 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 PAGR1Q9BTK6 254 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 VPS54Q9P1Q0 977 aa15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 MRPL11Q9Y3B7 192 aaKnown RBP15.95■□□□□ 0.14
CYSTM1-202ENST00000504227 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 SYT1P21579 422 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 STAT3P40763 770 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 TMEM132BQ14DG7 1078 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 SAFBQ15424 915 aaKnown RBP eCLIP15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 KRT40Q6A162 431 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 PPP1R18Q6NYC8 613 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 FBXO18Q8NFZ0 1043 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 TEX13BQ9BXU2 312 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 RBPJLQ9UBG7 517 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 MYH6P13533 1939 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 ZNF536O15090 1300 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 ABCB11O95342 1321 aa15.94■□□□□ 0.14
CYSTM1-202ENST00000504227 STX6O43752 255 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 ALAS1P13196 640 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 CALML3P27482 149 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 TKFCQ3LXA3 575 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 SNRNP48Q6IEG0 339 aaKnown RBP15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 GLT8D2Q9H1C3 349 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 ZFYVE28Q9HCC9 887 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 C6orf50Q9HD87 102 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 BTBD7Q9P203 1132 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 ZNF214Q9UL59 606 aaPredicted RBP15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 RLFQ13129 1914 aa15.93■□□□□ 0.14
CYSTM1-202ENST00000504227 ESYT2A0FGR8 921 aa15.92■□□□□ 0.14
CYSTM1-202ENST00000504227 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
CYSTM1-202ENST00000504227 SMCO2A6NFE2 343 aa15.92■□□□□ 0.14
CYSTM1-202ENST00000504227 GNA11P29992 359 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms