RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 SCAF8Q9UPN6 1271 aaKnown RBP11.7□□□□□ -0.54
CDK7-203ENST00000504147 TMX2Q9Y320 296 aa11.7□□□□□ -0.54
CDK7-203ENST00000504147 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
CDK7-203ENST00000504147 BRCA1P38398 1863 aaKnown RBP11.7□□□□□ -0.54
CDK7-203ENST00000504147 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
CDK7-203ENST00000504147 MCM7P33993 719 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 ECE1P42892 770 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 ADCY7P51828 1080 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 ATP2C1P98194 919 aaPredicted RBP11.69□□□□□ -0.54
CDK7-203ENST00000504147 GRIN1Q05586 938 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 PTGDRQ13258 359 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDK7-203ENST00000504147 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
CDK7-203ENST00000504147 CSRNP2Q9H175 543 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 DEFB129Q9H1M3 183 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 BIN2Q9UBW5 565 aaPredicted RBP11.69□□□□□ -0.54
CDK7-203ENST00000504147 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 SIPA1L1O43166 1804 aa11.69□□□□□ -0.54
CDK7-203ENST00000504147 TMEM232C9JQI7 657 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 INF2Q27J81 1249 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 SPECC1Q5M775 1068 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 SYDE2Q5VT97 1194 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 BTNL9Q6UXG8 535 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 C4orf32Q8N8J7 132 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 ANP32BQ92688 251 aaKnown RBP11.68□□□□□ -0.54
CDK7-203ENST00000504147 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 RIC8AQ9NPQ8 531 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
CDK7-203ENST00000504147 GREB1LQ9C091 1923 aaPredicted RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 ASNSP08243 561 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 EPS15P42566 896 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 MRPL12P52815 198 aaKnown RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 IKQ13123 557 aaPredicted RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 CDC37Q16543 378 aaPredicted RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 KIAA1755Q5JYT7 1200 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 NBPF12Q5TAG4 269 aaPredicted RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 ANGEL2Q5VTE6 544 aaKnown RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 APOBEC3FQ8IUX4 373 aaKnown RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 SPICE1Q8N0Z3 855 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
CDK7-203ENST00000504147 TRPM4Q8TD43 1214 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 GLT8D2Q9H1C3 349 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 PSTPIP2Q9H939 334 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 PCDHA1Q9Y5I3 950 aa11.67□□□□□ -0.54
CDK7-203ENST00000504147 MYH15Q9Y2K3 1946 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 VWA3AA6NCI4 1184 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
CDK7-203ENST00000504147 CAVIN2O95810 425 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 SNAP25P60880 206 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 IL17AQ16552 155 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 ANO6Q4KMQ2 910 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
CDK7-203ENST00000504147 KRBA2Q6ZNG9 492 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
CDK7-203ENST00000504147 CUL5Q93034 780 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 HOOK2Q96ED9 719 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 RNF181Q9P0P0 153 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
CDK7-203ENST00000504147 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.66□□□□□ -0.54
CDK7-203ENST00000504147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
CDK7-203ENST00000504147 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
CDK7-203ENST00000504147 DDNO94850 711 aaPredicted RBP11.65□□□□□ -0.54
CDK7-203ENST00000504147 YBX3P16989 372 aaKnown RBP eCLIP11.65□□□□□ -0.544e-8■■□□□ 14.1
CDK7-203ENST00000504147 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
CDK7-203ENST00000504147 STX1AQ16623 288 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 LETM2Q2VYF4 491 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 USP49Q70CQ1 688 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 NEK8Q86SG6 692 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 FAM200AQ8TCP9 573 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 TBCKQ8TEA7 893 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 CHURC1Q8WUH1 139 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 SYMPKQ92797 1274 aaKnown RBP11.65□□□□□ -0.54
CDK7-203ENST00000504147 ERCC4Q92889 916 aaPredicted RBP11.65□□□□□ -0.54
CDK7-203ENST00000504147 EPSTI1Q96J88 318 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 PPP1R9BQ96SB3 815 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 AMNQ9BXJ7 453 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 ZNF341Q9BYN7 854 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 ANO10Q9NW15 660 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
CDK7-203ENST00000504147 LAD1O00515 517 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 CCNT1O60563 726 aaKnown RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 PLA2G6O60733 806 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 LONP1P36776 959 aaKnown RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms